Gene : ALPHA DOX2 A. thaliana TAIR10
Primary Identifier:  ? AT1G73680 Defline:  (1 of 1) PTHR11903//PTHR11903:SF12 - PROSTAGLANDIN G/H SYNTHASE // ALPHA-DIOXYGENASE 2
Genomic Order:  6331 Name:  ? AT1G73680
Secondary Identifier:  ? PAC:19653437
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G73680 0.5kb upstream 0.5kb upstream 4075 true Chr1: 27703944-27708018 Arabidopsis thaliana
AT1G73680 0.5kb upstream 0.5kb upstream 500 false Chr1: 27707519-27708018 Arabidopsis thaliana
AT1G73680 0.5kb downstream 0.5kb downstream 4075 true Chr1: 27703444-27707518 Arabidopsis thaliana
AT1G73680 0.5kb downstream 0.5kb downstream 500 false Chr1: 27703444-27703943 Arabidopsis thaliana
AT1G73680 1.0kb upstream 1.0kb upstream 4575 true Chr1: 27703944-27708518 Arabidopsis thaliana
AT1G73680 1.0kb upstream 1.0kb upstream 1000 false Chr1: 27707519-27708518 Arabidopsis thaliana
AT1G73680 1.0kb downstream 1.0kb downstream 4575 true Chr1: 27702944-27707518 Arabidopsis thaliana
AT1G73680 1.0kb downstream 1.0kb downstream 1000 false Chr1: 27702944-27703943 Arabidopsis thaliana
AT1G73680 2.0kb upstream 2.0kb upstream 5575 true Chr1: 27703944-27709518 Arabidopsis thaliana
AT1G73680 2.0kb upstream 2.0kb upstream 2000 false Chr1: 27707519-27709518 Arabidopsis thaliana
AT1G73680 2.0kb downstream 2.0kb downstream 5575 true Chr1: 27701944-27707518 Arabidopsis thaliana
AT1G73680 2.0kb downstream 2.0kb downstream 2000 false Chr1: 27701944-27703943 Arabidopsis thaliana
AT1G73680 5.0kb upstream 5.0kb upstream 8575 true Chr1: 27703944-27712518 Arabidopsis thaliana
AT1G73680 5.0kb upstream 5.0kb upstream 5000 false Chr1: 27707519-27712518 Arabidopsis thaliana
AT1G73680 5.0kb downstream 5.0kb downstream 8575 true Chr1: 27698944-27707518 Arabidopsis thaliana
AT1G73680 5.0kb downstream 5.0kb downstream 5000 false Chr1: 27698944-27703943 Arabidopsis thaliana
AT1G73680 10.0kb upstream 10.0kb upstream 13575 true Chr1: 27703944-27717518 Arabidopsis thaliana
AT1G73680 10.0kb upstream 10.0kb upstream 10000 false Chr1: 27707519-27717518 Arabidopsis thaliana
AT1G73680 10.0kb downstream 10.0kb downstream 13575 true Chr1: 27693944-27707518 Arabidopsis thaliana
AT1G73680 10.0kb downstream 10.0kb downstream 10000 false Chr1: 27693944-27703943 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378633 5261 Brassicaceae View MSA
123841250 5264 Brassicales-Malvales View MSA
124344099 5266 SBM View MSA
124241515 5268 Malvidae View MSA
124072334 5270 Rosid View MSA
123745708 5271 Pentapetalae View MSA
122788092 5272 Eudicot View MSA
122049602 5273 Angiosperm View MSA
121344304 5274 Embryophyte View MSA
123380019 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.376        
cufflinks 0.425       Low
cufflinks 5.241        
cufflinks 1.009        
cufflinks 8.154       High
cufflinks 0.711        

0 Strain