Gene : PEPR1 A. thaliana TAIR10
Primary Identifier:  ? AT1G73080 Defline:  (1 of 2) PTHR27000:SF185 - LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PEPR1-RELATED
Genomic Order:  6266 Name:  ? AT1G73080
Secondary Identifier:  ? PAC:19657189
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G73080 0.5kb upstream 0.5kb upstream 4189 true Chr1: 27484013-27488201 Arabidopsis thaliana
AT1G73080 0.5kb upstream 0.5kb upstream 500 false Chr1: 27484013-27484512 Arabidopsis thaliana
AT1G73080 0.5kb downstream 0.5kb downstream 4189 true Chr1: 27484513-27488701 Arabidopsis thaliana
AT1G73080 0.5kb downstream 0.5kb downstream 500 false Chr1: 27488202-27488701 Arabidopsis thaliana
AT1G73080 1.0kb upstream 1.0kb upstream 4689 true Chr1: 27483513-27488201 Arabidopsis thaliana
AT1G73080 1.0kb upstream 1.0kb upstream 1000 false Chr1: 27483513-27484512 Arabidopsis thaliana
AT1G73080 1.0kb downstream 1.0kb downstream 4689 true Chr1: 27484513-27489201 Arabidopsis thaliana
AT1G73080 1.0kb downstream 1.0kb downstream 1000 false Chr1: 27488202-27489201 Arabidopsis thaliana
AT1G73080 2.0kb upstream 2.0kb upstream 5689 true Chr1: 27482513-27488201 Arabidopsis thaliana
AT1G73080 2.0kb upstream 2.0kb upstream 2000 false Chr1: 27482513-27484512 Arabidopsis thaliana
AT1G73080 2.0kb downstream 2.0kb downstream 5689 true Chr1: 27484513-27490201 Arabidopsis thaliana
AT1G73080 2.0kb downstream 2.0kb downstream 2000 false Chr1: 27488202-27490201 Arabidopsis thaliana
AT1G73080 5.0kb upstream 5.0kb upstream 8689 true Chr1: 27479513-27488201 Arabidopsis thaliana
AT1G73080 5.0kb upstream 5.0kb upstream 5000 false Chr1: 27479513-27484512 Arabidopsis thaliana
AT1G73080 5.0kb downstream 5.0kb downstream 8689 true Chr1: 27484513-27493201 Arabidopsis thaliana
AT1G73080 5.0kb downstream 5.0kb downstream 5000 false Chr1: 27488202-27493201 Arabidopsis thaliana
AT1G73080 10.0kb upstream 10.0kb upstream 13689 true Chr1: 27474513-27488201 Arabidopsis thaliana
AT1G73080 10.0kb upstream 10.0kb upstream 10000 false Chr1: 27474513-27484512 Arabidopsis thaliana
AT1G73080 10.0kb downstream 10.0kb downstream 13689 true Chr1: 27484513-27498201 Arabidopsis thaliana
AT1G73080 10.0kb downstream 10.0kb downstream 10000 false Chr1: 27488202-27498201 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122788329 5272 Eudicot View MSA
122367022 5261 Brassicaceae View MSA
123831428 5264 Brassicales-Malvales View MSA
124341599 5266 SBM View MSA
124241370 5268 Malvidae View MSA
124066125 5270 Rosid View MSA
123746657 5271 Pentapetalae View MSA
122046482 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.167       Low
cufflinks 116.962     High High
cufflinks 20.064        
cufflinks 80.872     High  
cufflinks 13.543       Low
cufflinks 108.403     High  

0 Strain