Gene : AT1G79630 A. thaliana TAIR10
Defline:  (1 of 4) PTHR13832//PTHR13832:SF286 - PROTEIN PHOSPHATASE 2C // PROTEIN PHOSPHATASE 2C 33-RELATED Genomic Order:  6940
Name:  ? AT1G79630 Secondary Identifier:  ? PAC:19657123
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G79630 0.5kb upstream 0.5kb upstream 3651 true Chr1: 29962645-29966295 Arabidopsis thaliana
AT1G79630 0.5kb upstream 0.5kb upstream 500 false Chr1: 29965796-29966295 Arabidopsis thaliana
AT1G79630 0.5kb downstream 0.5kb downstream 3651 true Chr1: 29962145-29965795 Arabidopsis thaliana
AT1G79630 0.5kb downstream 0.5kb downstream 500 false Chr1: 29962145-29962644 Arabidopsis thaliana
AT1G79630 1.0kb upstream 1.0kb upstream 4151 true Chr1: 29962645-29966795 Arabidopsis thaliana
AT1G79630 1.0kb upstream 1.0kb upstream 1000 false Chr1: 29965796-29966795 Arabidopsis thaliana
AT1G79630 1.0kb downstream 1.0kb downstream 4151 true Chr1: 29961645-29965795 Arabidopsis thaliana
AT1G79630 1.0kb downstream 1.0kb downstream 1000 false Chr1: 29961645-29962644 Arabidopsis thaliana
AT1G79630 2.0kb upstream 2.0kb upstream 5151 true Chr1: 29962645-29967795 Arabidopsis thaliana
AT1G79630 2.0kb upstream 2.0kb upstream 2000 false Chr1: 29965796-29967795 Arabidopsis thaliana
AT1G79630 2.0kb downstream 2.0kb downstream 5151 true Chr1: 29960645-29965795 Arabidopsis thaliana
AT1G79630 2.0kb downstream 2.0kb downstream 2000 false Chr1: 29960645-29962644 Arabidopsis thaliana
AT1G79630 5.0kb upstream 5.0kb upstream 8151 true Chr1: 29962645-29970795 Arabidopsis thaliana
AT1G79630 5.0kb upstream 5.0kb upstream 5000 false Chr1: 29965796-29970795 Arabidopsis thaliana
AT1G79630 5.0kb downstream 5.0kb downstream 8151 true Chr1: 29957645-29965795 Arabidopsis thaliana
AT1G79630 5.0kb downstream 5.0kb downstream 5000 false Chr1: 29957645-29962644 Arabidopsis thaliana
AT1G79630 10.0kb upstream 10.0kb upstream 13151 true Chr1: 29962645-29975795 Arabidopsis thaliana
AT1G79630 10.0kb upstream 10.0kb upstream 10000 false Chr1: 29965796-29975795 Arabidopsis thaliana
AT1G79630 10.0kb downstream 10.0kb downstream 13151 true Chr1: 29952645-29965795 Arabidopsis thaliana
AT1G79630 10.0kb downstream 10.0kb downstream 10000 false Chr1: 29952645-29962644 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362395 5261 Brassicaceae View MSA
123837854 5264 Brassicales-Malvales View MSA
124338188 5266 SBM View MSA
124238908 5268 Malvidae View MSA
124068066 5270 Rosid View MSA
123751353 5271 Pentapetalae View MSA
122793781 5272 Eudicot View MSA
122043983 5273 Angiosperm View MSA
121350683 5274 Embryophyte View MSA
123426661 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.575        
cufflinks 5.876        
cufflinks 1.108       Low
cufflinks 5.522        
cufflinks 1.03       Low
cufflinks 5.321        

0 Strain