Gene : MUB5 A. thaliana TAIR10
Primary Identifier:  ? AT1G77870 Defline:  (1 of 6) PTHR13169 - UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN
Genomic Order:  6762 Name:  ? AT1G77870
Secondary Identifier:  ? PAC:19656628
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G77870 0.5kb upstream 0.5kb upstream 1312 true Chr1: 29284578-29285889 Arabidopsis thaliana
AT1G77870 0.5kb upstream 0.5kb upstream 500 false Chr1: 29284578-29285077 Arabidopsis thaliana
AT1G77870 0.5kb downstream 0.5kb downstream 1312 true Chr1: 29285078-29286389 Arabidopsis thaliana
AT1G77870 0.5kb downstream 0.5kb downstream 500 false Chr1: 29285890-29286389 Arabidopsis thaliana
AT1G77870 1.0kb upstream 1.0kb upstream 1812 true Chr1: 29284078-29285889 Arabidopsis thaliana
AT1G77870 1.0kb upstream 1.0kb upstream 1000 false Chr1: 29284078-29285077 Arabidopsis thaliana
AT1G77870 1.0kb downstream 1.0kb downstream 1812 true Chr1: 29285078-29286889 Arabidopsis thaliana
AT1G77870 1.0kb downstream 1.0kb downstream 1000 false Chr1: 29285890-29286889 Arabidopsis thaliana
AT1G77870 2.0kb upstream 2.0kb upstream 2812 true Chr1: 29283078-29285889 Arabidopsis thaliana
AT1G77870 2.0kb upstream 2.0kb upstream 2000 false Chr1: 29283078-29285077 Arabidopsis thaliana
AT1G77870 2.0kb downstream 2.0kb downstream 2812 true Chr1: 29285078-29287889 Arabidopsis thaliana
AT1G77870 2.0kb downstream 2.0kb downstream 2000 false Chr1: 29285890-29287889 Arabidopsis thaliana
AT1G77870 5.0kb upstream 5.0kb upstream 5812 true Chr1: 29280078-29285889 Arabidopsis thaliana
AT1G77870 5.0kb upstream 5.0kb upstream 5000 false Chr1: 29280078-29285077 Arabidopsis thaliana
AT1G77870 5.0kb downstream 5.0kb downstream 5812 true Chr1: 29285078-29290889 Arabidopsis thaliana
AT1G77870 5.0kb downstream 5.0kb downstream 5000 false Chr1: 29285890-29290889 Arabidopsis thaliana
AT1G77870 10.0kb upstream 10.0kb upstream 10812 true Chr1: 29275078-29285889 Arabidopsis thaliana
AT1G77870 10.0kb upstream 10.0kb upstream 10000 false Chr1: 29275078-29285077 Arabidopsis thaliana
AT1G77870 10.0kb downstream 10.0kb downstream 10812 true Chr1: 29285078-29295889 Arabidopsis thaliana
AT1G77870 10.0kb downstream 10.0kb downstream 10000 false Chr1: 29285890-29295889 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378454 5261 Brassicaceae View MSA
123835560 5264 Brassicales-Malvales View MSA
124340130 5266 SBM View MSA
124244751 5268 Malvidae View MSA
124069893 5270 Rosid View MSA
123744059 5271 Pentapetalae View MSA
122795764 5272 Eudicot View MSA
122050739 5273 Angiosperm View MSA
121344338 5274 Embryophyte View MSA
123427741 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.713       High
cufflinks 0.765        
cufflinks 1.538       High
cufflinks 0.888        
cufflinks 0.95        
cufflinks 0.837        

0 Strain