Gene : SOB3 A. thaliana TAIR10
Primary Identifier:  ? AT1G76500 Defline:  (1 of 2) PTHR31100//PTHR31100:SF5 - FAMILY NOT NAMED // AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 29-RELATED
Genomic Order:  6614 Name:  ? AT1G76500
Secondary Identifier:  ? PAC:19656151
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G76500 0.5kb upstream 0.5kb upstream 1536 true Chr1: 28705027-28706562 Arabidopsis thaliana
AT1G76500 0.5kb upstream 0.5kb upstream 500 false Chr1: 28705027-28705526 Arabidopsis thaliana
AT1G76500 0.5kb downstream 0.5kb downstream 1536 true Chr1: 28705527-28707062 Arabidopsis thaliana
AT1G76500 0.5kb downstream 0.5kb downstream 500 false Chr1: 28706563-28707062 Arabidopsis thaliana
AT1G76500 1.0kb upstream 1.0kb upstream 2036 true Chr1: 28704527-28706562 Arabidopsis thaliana
AT1G76500 1.0kb upstream 1.0kb upstream 1000 false Chr1: 28704527-28705526 Arabidopsis thaliana
AT1G76500 1.0kb downstream 1.0kb downstream 2036 true Chr1: 28705527-28707562 Arabidopsis thaliana
AT1G76500 1.0kb downstream 1.0kb downstream 1000 false Chr1: 28706563-28707562 Arabidopsis thaliana
AT1G76500 2.0kb upstream 2.0kb upstream 3036 true Chr1: 28703527-28706562 Arabidopsis thaliana
AT1G76500 2.0kb upstream 2.0kb upstream 2000 false Chr1: 28703527-28705526 Arabidopsis thaliana
AT1G76500 2.0kb downstream 2.0kb downstream 3036 true Chr1: 28705527-28708562 Arabidopsis thaliana
AT1G76500 2.0kb downstream 2.0kb downstream 2000 false Chr1: 28706563-28708562 Arabidopsis thaliana
AT1G76500 5.0kb upstream 5.0kb upstream 6036 true Chr1: 28700527-28706562 Arabidopsis thaliana
AT1G76500 5.0kb upstream 5.0kb upstream 5000 false Chr1: 28700527-28705526 Arabidopsis thaliana
AT1G76500 5.0kb downstream 5.0kb downstream 6036 true Chr1: 28705527-28711562 Arabidopsis thaliana
AT1G76500 5.0kb downstream 5.0kb downstream 5000 false Chr1: 28706563-28711562 Arabidopsis thaliana
AT1G76500 10.0kb upstream 10.0kb upstream 11036 true Chr1: 28695527-28706562 Arabidopsis thaliana
AT1G76500 10.0kb upstream 10.0kb upstream 10000 false Chr1: 28695527-28705526 Arabidopsis thaliana
AT1G76500 10.0kb downstream 10.0kb downstream 11036 true Chr1: 28705527-28716562 Arabidopsis thaliana
AT1G76500 10.0kb downstream 10.0kb downstream 10000 false Chr1: 28706563-28716562 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374836 5261 Brassicaceae View MSA
123839687 5264 Brassicales-Malvales View MSA
124337593 5266 SBM View MSA
124244739 5268 Malvidae View MSA
124072803 5270 Rosid View MSA
123751689 5271 Pentapetalae View MSA
122796160 5272 Eudicot View MSA
122048201 5273 Angiosperm View MSA
121348557 5274 Embryophyte View MSA
123380913 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.014     Low Low
cufflinks 7.568        
cufflinks 0.037     Low  
cufflinks 8.673        
cufflinks 0.022     Low  
cufflinks 7.153        

0 Strain