Gene : BBD1 A. thaliana TAIR10
Primary Identifier:  ? AT1G75380 Defline:  (1 of 2) PTHR15160:SF3 - BIFUNCTIONAL NUCLEASE 1-RELATED
Genomic Order:  6505 Name:  ? AT1G75380
Secondary Identifier:  ? PAC:19656098
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G75380 0.5kb upstream 0.5kb upstream 3157 true Chr1: 28281389-28284545 Arabidopsis thaliana
AT1G75380 0.5kb upstream 0.5kb upstream 500 false Chr1: 28284046-28284545 Arabidopsis thaliana
AT1G75380 0.5kb downstream 0.5kb downstream 3157 true Chr1: 28280889-28284045 Arabidopsis thaliana
AT1G75380 0.5kb downstream 0.5kb downstream 500 false Chr1: 28280889-28281388 Arabidopsis thaliana
AT1G75380 1.0kb upstream 1.0kb upstream 3657 true Chr1: 28281389-28285045 Arabidopsis thaliana
AT1G75380 1.0kb upstream 1.0kb upstream 1000 false Chr1: 28284046-28285045 Arabidopsis thaliana
AT1G75380 1.0kb downstream 1.0kb downstream 3657 true Chr1: 28280389-28284045 Arabidopsis thaliana
AT1G75380 1.0kb downstream 1.0kb downstream 1000 false Chr1: 28280389-28281388 Arabidopsis thaliana
AT1G75380 2.0kb upstream 2.0kb upstream 4657 true Chr1: 28281389-28286045 Arabidopsis thaliana
AT1G75380 2.0kb upstream 2.0kb upstream 2000 false Chr1: 28284046-28286045 Arabidopsis thaliana
AT1G75380 2.0kb downstream 2.0kb downstream 4657 true Chr1: 28279389-28284045 Arabidopsis thaliana
AT1G75380 2.0kb downstream 2.0kb downstream 2000 false Chr1: 28279389-28281388 Arabidopsis thaliana
AT1G75380 5.0kb upstream 5.0kb upstream 7657 true Chr1: 28281389-28289045 Arabidopsis thaliana
AT1G75380 5.0kb upstream 5.0kb upstream 5000 false Chr1: 28284046-28289045 Arabidopsis thaliana
AT1G75380 5.0kb downstream 5.0kb downstream 7657 true Chr1: 28276389-28284045 Arabidopsis thaliana
AT1G75380 5.0kb downstream 5.0kb downstream 5000 false Chr1: 28276389-28281388 Arabidopsis thaliana
AT1G75380 10.0kb upstream 10.0kb upstream 12657 true Chr1: 28281389-28294045 Arabidopsis thaliana
AT1G75380 10.0kb upstream 10.0kb upstream 10000 false Chr1: 28284046-28294045 Arabidopsis thaliana
AT1G75380 10.0kb downstream 10.0kb downstream 12657 true Chr1: 28271389-28284045 Arabidopsis thaliana
AT1G75380 10.0kb downstream 10.0kb downstream 10000 false Chr1: 28271389-28281388 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380470 5261 Brassicaceae View MSA
123833088 5264 Brassicales-Malvales View MSA
124345202 5266 SBM View MSA
124242607 5268 Malvidae View MSA
124063334 5270 Rosid View MSA
123751879 5271 Pentapetalae View MSA
122794039 5272 Eudicot View MSA
122042536 5273 Angiosperm View MSA
121348555 5274 Embryophyte View MSA
123425976 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 61.273     High  
cufflinks 8.227        
cufflinks 47.294     High  
cufflinks 10.712        
cufflinks 75.443     High High
cufflinks 6.418       Low

0 Strain