Gene : TCP24 A. thaliana TAIR10
Primary Identifier:  ? AT1G30210 Defline:  (1 of 2) PTHR31072:SF2 - TRANSCRIPTION FACTOR TCP2-RELATED
Genomic Order:  2988 Name:  ? AT1G30210
Secondary Identifier:  ? PAC:19650444
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G30210 0.5kb upstream 0.5kb upstream 3926 true Chr1: 10627185-10631110 Arabidopsis thaliana
AT1G30210 0.5kb upstream 0.5kb upstream 500 false Chr1: 10630611-10631110 Arabidopsis thaliana
AT1G30210 0.5kb downstream 0.5kb downstream 3926 true Chr1: 10626685-10630610 Arabidopsis thaliana
AT1G30210 0.5kb downstream 0.5kb downstream 500 false Chr1: 10626685-10627184 Arabidopsis thaliana
AT1G30210 1.0kb upstream 1.0kb upstream 4426 true Chr1: 10627185-10631610 Arabidopsis thaliana
AT1G30210 1.0kb upstream 1.0kb upstream 1000 false Chr1: 10630611-10631610 Arabidopsis thaliana
AT1G30210 1.0kb downstream 1.0kb downstream 4426 true Chr1: 10626185-10630610 Arabidopsis thaliana
AT1G30210 1.0kb downstream 1.0kb downstream 1000 false Chr1: 10626185-10627184 Arabidopsis thaliana
AT1G30210 2.0kb upstream 2.0kb upstream 5426 true Chr1: 10627185-10632610 Arabidopsis thaliana
AT1G30210 2.0kb upstream 2.0kb upstream 2000 false Chr1: 10630611-10632610 Arabidopsis thaliana
AT1G30210 2.0kb downstream 2.0kb downstream 5426 true Chr1: 10625185-10630610 Arabidopsis thaliana
AT1G30210 2.0kb downstream 2.0kb downstream 2000 false Chr1: 10625185-10627184 Arabidopsis thaliana
AT1G30210 5.0kb upstream 5.0kb upstream 8426 true Chr1: 10627185-10635610 Arabidopsis thaliana
AT1G30210 5.0kb upstream 5.0kb upstream 5000 false Chr1: 10630611-10635610 Arabidopsis thaliana
AT1G30210 5.0kb downstream 5.0kb downstream 8426 true Chr1: 10622185-10630610 Arabidopsis thaliana
AT1G30210 5.0kb downstream 5.0kb downstream 5000 false Chr1: 10622185-10627184 Arabidopsis thaliana
AT1G30210 10.0kb upstream 10.0kb upstream 13426 true Chr1: 10627185-10640610 Arabidopsis thaliana
AT1G30210 10.0kb upstream 10.0kb upstream 10000 false Chr1: 10630611-10640610 Arabidopsis thaliana
AT1G30210 10.0kb downstream 10.0kb downstream 13426 true Chr1: 10617185-10630610 Arabidopsis thaliana
AT1G30210 10.0kb downstream 10.0kb downstream 10000 false Chr1: 10617185-10627184 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364296 5261 Brassicaceae View MSA
123798726 5264 Brassicales-Malvales View MSA
124296326 5266 SBM View MSA
124148507 5268 Malvidae View MSA
124069412 5270 Rosid View MSA
123743584 5271 Pentapetalae View MSA
122787368 5272 Eudicot View MSA
122042527 5273 Angiosperm View MSA
121350950 5274 Embryophyte View MSA
123381946 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.795       High
cufflinks 5.921        
cufflinks 7.89       High
cufflinks 5.37       Low
cufflinks 6.86        
cufflinks 6.689        

0 Strain