Gene : AT1G28310 A. thaliana TAIR10
Defline:  (1 of 6) PTHR31992:SF8 - DOF ZINC FINGER PROTEIN DOF1.1-RELATED Genomic Order:  2814
Name:  ? AT1G28310 Secondary Identifier:  ? PAC:19658114
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G28310 0.5kb upstream 0.5kb upstream 2440 true Chr1: 9911898-9914337 Arabidopsis thaliana
AT1G28310 0.5kb upstream 0.5kb upstream 500 false Chr1: 9913838-9914337 Arabidopsis thaliana
AT1G28310 0.5kb downstream 0.5kb downstream 2440 true Chr1: 9911398-9913837 Arabidopsis thaliana
AT1G28310 0.5kb downstream 0.5kb downstream 500 false Chr1: 9911398-9911897 Arabidopsis thaliana
AT1G28310 1.0kb upstream 1.0kb upstream 2940 true Chr1: 9911898-9914837 Arabidopsis thaliana
AT1G28310 1.0kb upstream 1.0kb upstream 1000 false Chr1: 9913838-9914837 Arabidopsis thaliana
AT1G28310 1.0kb downstream 1.0kb downstream 2940 true Chr1: 9910898-9913837 Arabidopsis thaliana
AT1G28310 1.0kb downstream 1.0kb downstream 1000 false Chr1: 9910898-9911897 Arabidopsis thaliana
AT1G28310 2.0kb upstream 2.0kb upstream 3940 true Chr1: 9911898-9915837 Arabidopsis thaliana
AT1G28310 2.0kb upstream 2.0kb upstream 2000 false Chr1: 9913838-9915837 Arabidopsis thaliana
AT1G28310 2.0kb downstream 2.0kb downstream 3940 true Chr1: 9909898-9913837 Arabidopsis thaliana
AT1G28310 2.0kb downstream 2.0kb downstream 2000 false Chr1: 9909898-9911897 Arabidopsis thaliana
AT1G28310 5.0kb upstream 5.0kb upstream 6940 true Chr1: 9911898-9918837 Arabidopsis thaliana
AT1G28310 5.0kb upstream 5.0kb upstream 5000 false Chr1: 9913838-9918837 Arabidopsis thaliana
AT1G28310 5.0kb downstream 5.0kb downstream 6940 true Chr1: 9906898-9913837 Arabidopsis thaliana
AT1G28310 5.0kb downstream 5.0kb downstream 5000 false Chr1: 9906898-9911897 Arabidopsis thaliana
AT1G28310 10.0kb upstream 10.0kb upstream 11940 true Chr1: 9911898-9923837 Arabidopsis thaliana
AT1G28310 10.0kb upstream 10.0kb upstream 10000 false Chr1: 9913838-9923837 Arabidopsis thaliana
AT1G28310 10.0kb downstream 10.0kb downstream 11940 true Chr1: 9901898-9913837 Arabidopsis thaliana
AT1G28310 10.0kb downstream 10.0kb downstream 10000 false Chr1: 9901898-9911897 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364322 5261 Brassicaceae View MSA
123829193 5264 Brassicales-Malvales View MSA
124341995 5266 SBM View MSA
124253638 5268 Malvidae View MSA
124070835 5270 Rosid View MSA
123748434 5271 Pentapetalae View MSA
122796456 5272 Eudicot View MSA
122050733 5273 Angiosperm View MSA
121349903 5274 Embryophyte View MSA
123427226 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.201       High
cufflinks 0.832        
cufflinks 1.423        
cufflinks 1.7        
cufflinks 2.097        
cufflinks 0.576       Low

0 Strain