Gene : AT1G27480 A. thaliana TAIR10
Defline:  (1 of 1) 2.3.1.43 - Phosphatidylcholine--sterol O-acyltransferase / Phospholipid--cholesterol acyltransferase Genomic Order:  2726
Name:  ? AT1G27480 Secondary Identifier:  ? PAC:19657187
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G27480 0.5kb upstream 0.5kb upstream 2272 true Chr1: 9544014-9546285 Arabidopsis thaliana
AT1G27480 0.5kb upstream 0.5kb upstream 500 false Chr1: 9544014-9544513 Arabidopsis thaliana
AT1G27480 0.5kb downstream 0.5kb downstream 2272 true Chr1: 9544514-9546785 Arabidopsis thaliana
AT1G27480 0.5kb downstream 0.5kb downstream 500 false Chr1: 9546286-9546785 Arabidopsis thaliana
AT1G27480 1.0kb upstream 1.0kb upstream 2772 true Chr1: 9543514-9546285 Arabidopsis thaliana
AT1G27480 1.0kb upstream 1.0kb upstream 1000 false Chr1: 9543514-9544513 Arabidopsis thaliana
AT1G27480 1.0kb downstream 1.0kb downstream 2772 true Chr1: 9544514-9547285 Arabidopsis thaliana
AT1G27480 1.0kb downstream 1.0kb downstream 1000 false Chr1: 9546286-9547285 Arabidopsis thaliana
AT1G27480 2.0kb upstream 2.0kb upstream 3772 true Chr1: 9542514-9546285 Arabidopsis thaliana
AT1G27480 2.0kb upstream 2.0kb upstream 2000 false Chr1: 9542514-9544513 Arabidopsis thaliana
AT1G27480 2.0kb downstream 2.0kb downstream 3772 true Chr1: 9544514-9548285 Arabidopsis thaliana
AT1G27480 2.0kb downstream 2.0kb downstream 2000 false Chr1: 9546286-9548285 Arabidopsis thaliana
AT1G27480 5.0kb upstream 5.0kb upstream 6772 true Chr1: 9539514-9546285 Arabidopsis thaliana
AT1G27480 5.0kb upstream 5.0kb upstream 5000 false Chr1: 9539514-9544513 Arabidopsis thaliana
AT1G27480 5.0kb downstream 5.0kb downstream 6772 true Chr1: 9544514-9551285 Arabidopsis thaliana
AT1G27480 5.0kb downstream 5.0kb downstream 5000 false Chr1: 9546286-9551285 Arabidopsis thaliana
AT1G27480 10.0kb upstream 10.0kb upstream 11772 true Chr1: 9534514-9546285 Arabidopsis thaliana
AT1G27480 10.0kb upstream 10.0kb upstream 10000 false Chr1: 9534514-9544513 Arabidopsis thaliana
AT1G27480 10.0kb downstream 10.0kb downstream 11772 true Chr1: 9544514-9556285 Arabidopsis thaliana
AT1G27480 10.0kb downstream 10.0kb downstream 10000 false Chr1: 9546286-9556285 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372689 5261 Brassicaceae View MSA
123829286 5264 Brassicales-Malvales View MSA
124344445 5266 SBM View MSA
124242658 5268 Malvidae View MSA
124050426 5270 Rosid View MSA
123738135 5271 Pentapetalae View MSA
122785925 5272 Eudicot View MSA
122051550 5273 Angiosperm View MSA
121347013 5274 Embryophyte View MSA
123427608 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.19        
cufflinks 0.008     Low Low
cufflinks 20.972        
cufflinks 0.044     Low  
cufflinks 10.676        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain