Gene : CYP59 A. thaliana TAIR10
Primary Identifier:  ? AT1G53720 Defline:  (1 of 1) K12735 - peptidyl-prolyl cis-trans isomerase-like 4 [EC:5.2.1.8] (PPIL4)
Genomic Order:  4421 Name:  ? AT1G53720
Secondary Identifier:  ? PAC:19655865
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G53720 0.5kb upstream 0.5kb upstream 3606 true Chr1: 20056033-20059638 Arabidopsis thaliana
AT1G53720 0.5kb upstream 0.5kb upstream 500 false Chr1: 20056033-20056532 Arabidopsis thaliana
AT1G53720 0.5kb downstream 0.5kb downstream 3606 true Chr1: 20056533-20060138 Arabidopsis thaliana
AT1G53720 0.5kb downstream 0.5kb downstream 500 false Chr1: 20059639-20060138 Arabidopsis thaliana
AT1G53720 1.0kb upstream 1.0kb upstream 4106 true Chr1: 20055533-20059638 Arabidopsis thaliana
AT1G53720 1.0kb upstream 1.0kb upstream 1000 false Chr1: 20055533-20056532 Arabidopsis thaliana
AT1G53720 1.0kb downstream 1.0kb downstream 4106 true Chr1: 20056533-20060638 Arabidopsis thaliana
AT1G53720 1.0kb downstream 1.0kb downstream 1000 false Chr1: 20059639-20060638 Arabidopsis thaliana
AT1G53720 2.0kb upstream 2.0kb upstream 5106 true Chr1: 20054533-20059638 Arabidopsis thaliana
AT1G53720 2.0kb upstream 2.0kb upstream 2000 false Chr1: 20054533-20056532 Arabidopsis thaliana
AT1G53720 2.0kb downstream 2.0kb downstream 5106 true Chr1: 20056533-20061638 Arabidopsis thaliana
AT1G53720 2.0kb downstream 2.0kb downstream 2000 false Chr1: 20059639-20061638 Arabidopsis thaliana
AT1G53720 5.0kb upstream 5.0kb upstream 8106 true Chr1: 20051533-20059638 Arabidopsis thaliana
AT1G53720 5.0kb upstream 5.0kb upstream 5000 false Chr1: 20051533-20056532 Arabidopsis thaliana
AT1G53720 5.0kb downstream 5.0kb downstream 8106 true Chr1: 20056533-20064638 Arabidopsis thaliana
AT1G53720 5.0kb downstream 5.0kb downstream 5000 false Chr1: 20059639-20064638 Arabidopsis thaliana
AT1G53720 10.0kb upstream 10.0kb upstream 13106 true Chr1: 20046533-20059638 Arabidopsis thaliana
AT1G53720 10.0kb upstream 10.0kb upstream 10000 false Chr1: 20046533-20056532 Arabidopsis thaliana
AT1G53720 10.0kb downstream 10.0kb downstream 13106 true Chr1: 20056533-20069638 Arabidopsis thaliana
AT1G53720 10.0kb downstream 10.0kb downstream 10000 false Chr1: 20059639-20069638 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365836 5261 Brassicaceae View MSA
123832251 5264 Brassicales-Malvales View MSA
124341987 5266 SBM View MSA
124237175 5268 Malvidae View MSA
124062443 5270 Rosid View MSA
123738773 5271 Pentapetalae View MSA
122790926 5272 Eudicot View MSA
122041722 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121349576 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.771        
cufflinks 8.756        
cufflinks 4.922       Low
cufflinks 9.549       High
cufflinks 4.844       Low
cufflinks 7.408        

0 Strain