Gene : AT1G52110 A. thaliana TAIR10
Defline:  (1 of 39) PTHR23244:SF208 - F14M2.9 PROTEIN-RELATED Genomic Order:  4239
Name:  ? AT1G52110 Secondary Identifier:  ? PAC:19650943
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G52110 0.5kb upstream 0.5kb upstream 3452 true Chr1: 19386789-19390240 Arabidopsis thaliana
AT1G52110 0.5kb upstream 0.5kb upstream 500 false Chr1: 19389741-19390240 Arabidopsis thaliana
AT1G52110 0.5kb downstream 0.5kb downstream 3452 true Chr1: 19386289-19389740 Arabidopsis thaliana
AT1G52110 0.5kb downstream 0.5kb downstream 500 false Chr1: 19386289-19386788 Arabidopsis thaliana
AT1G52110 1.0kb upstream 1.0kb upstream 3952 true Chr1: 19386789-19390740 Arabidopsis thaliana
AT1G52110 1.0kb upstream 1.0kb upstream 1000 false Chr1: 19389741-19390740 Arabidopsis thaliana
AT1G52110 1.0kb downstream 1.0kb downstream 3952 true Chr1: 19385789-19389740 Arabidopsis thaliana
AT1G52110 1.0kb downstream 1.0kb downstream 1000 false Chr1: 19385789-19386788 Arabidopsis thaliana
AT1G52110 2.0kb upstream 2.0kb upstream 4952 true Chr1: 19386789-19391740 Arabidopsis thaliana
AT1G52110 2.0kb upstream 2.0kb upstream 2000 false Chr1: 19389741-19391740 Arabidopsis thaliana
AT1G52110 2.0kb downstream 2.0kb downstream 4952 true Chr1: 19384789-19389740 Arabidopsis thaliana
AT1G52110 2.0kb downstream 2.0kb downstream 2000 false Chr1: 19384789-19386788 Arabidopsis thaliana
AT1G52110 5.0kb upstream 5.0kb upstream 7952 true Chr1: 19386789-19394740 Arabidopsis thaliana
AT1G52110 5.0kb upstream 5.0kb upstream 5000 false Chr1: 19389741-19394740 Arabidopsis thaliana
AT1G52110 5.0kb downstream 5.0kb downstream 7952 true Chr1: 19381789-19389740 Arabidopsis thaliana
AT1G52110 5.0kb downstream 5.0kb downstream 5000 false Chr1: 19381789-19386788 Arabidopsis thaliana
AT1G52110 10.0kb upstream 10.0kb upstream 12952 true Chr1: 19386789-19399740 Arabidopsis thaliana
AT1G52110 10.0kb upstream 10.0kb upstream 10000 false Chr1: 19389741-19399740 Arabidopsis thaliana
AT1G52110 10.0kb downstream 10.0kb downstream 12952 true Chr1: 19376789-19389740 Arabidopsis thaliana
AT1G52110 10.0kb downstream 10.0kb downstream 10000 false Chr1: 19376789-19386788 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381403 5261 Brassicaceae View MSA
123803224 5264 Brassicales-Malvales View MSA
124300349 5266 SBM View MSA
124151549 5268 Malvidae View MSA
124050503 5270 Rosid View MSA
123753130 5271 Pentapetalae View MSA
122797480 5272 Eudicot View MSA
122051624 5273 Angiosperm View MSA
121351046 5274 Embryophyte View MSA
123381988 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.01     Low Low
cufflinks 0.026     Low  
cufflinks 0.017     Low  
cufflinks 0.034     Low High
cufflinks 0.031     Low  
cufflinks 0.011     Low Low

0 Strain