Gene : AT1G50710 A. thaliana TAIR10
Defline:  (1 of 1) PTHR16219:SF1 - HAUS AUGMIN-LIKE COMPLEX SUBUNIT 4 Genomic Order:  4094
Name:  ? AT1G50710 Secondary Identifier:  ? PAC:19656835
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G50710 0.5kb upstream 0.5kb upstream 3794 true Chr1: 18784509-18788302 Arabidopsis thaliana
AT1G50710 0.5kb upstream 0.5kb upstream 500 false Chr1: 18787803-18788302 Arabidopsis thaliana
AT1G50710 0.5kb downstream 0.5kb downstream 3794 true Chr1: 18784009-18787802 Arabidopsis thaliana
AT1G50710 0.5kb downstream 0.5kb downstream 500 false Chr1: 18784009-18784508 Arabidopsis thaliana
AT1G50710 1.0kb upstream 1.0kb upstream 4294 true Chr1: 18784509-18788802 Arabidopsis thaliana
AT1G50710 1.0kb upstream 1.0kb upstream 1000 false Chr1: 18787803-18788802 Arabidopsis thaliana
AT1G50710 1.0kb downstream 1.0kb downstream 4294 true Chr1: 18783509-18787802 Arabidopsis thaliana
AT1G50710 1.0kb downstream 1.0kb downstream 1000 false Chr1: 18783509-18784508 Arabidopsis thaliana
AT1G50710 2.0kb upstream 2.0kb upstream 5294 true Chr1: 18784509-18789802 Arabidopsis thaliana
AT1G50710 2.0kb upstream 2.0kb upstream 2000 false Chr1: 18787803-18789802 Arabidopsis thaliana
AT1G50710 2.0kb downstream 2.0kb downstream 5294 true Chr1: 18782509-18787802 Arabidopsis thaliana
AT1G50710 2.0kb downstream 2.0kb downstream 2000 false Chr1: 18782509-18784508 Arabidopsis thaliana
AT1G50710 5.0kb upstream 5.0kb upstream 8294 true Chr1: 18784509-18792802 Arabidopsis thaliana
AT1G50710 5.0kb upstream 5.0kb upstream 5000 false Chr1: 18787803-18792802 Arabidopsis thaliana
AT1G50710 5.0kb downstream 5.0kb downstream 8294 true Chr1: 18779509-18787802 Arabidopsis thaliana
AT1G50710 5.0kb downstream 5.0kb downstream 5000 false Chr1: 18779509-18784508 Arabidopsis thaliana
AT1G50710 10.0kb upstream 10.0kb upstream 13294 true Chr1: 18784509-18797802 Arabidopsis thaliana
AT1G50710 10.0kb upstream 10.0kb upstream 10000 false Chr1: 18787803-18797802 Arabidopsis thaliana
AT1G50710 10.0kb downstream 10.0kb downstream 13294 true Chr1: 18774509-18787802 Arabidopsis thaliana
AT1G50710 10.0kb downstream 10.0kb downstream 10000 false Chr1: 18774509-18784508 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042369 5273 Angiosperm View MSA
122361679 5261 Brassicaceae View MSA
123829815 5264 Brassicales-Malvales View MSA
124346342 5266 SBM View MSA
124237877 5268 Malvidae View MSA
124061631 5270 Rosid View MSA
123749615 5271 Pentapetalae View MSA
122789207 5272 Eudicot View MSA
121345524 5274 Embryophyte View MSA
123380233 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.117        
cufflinks 12.212        
cufflinks 4.39       Low
cufflinks 12.05        
cufflinks 4.493       Low
cufflinks 12.589        

0 Strain