Gene : AT1G49640 A. thaliana TAIR10
Defline:  (1 of 4) PTHR23024//PTHR23024:SF131 - MEMBER OF 'GDXG' FAMILY OF LIPOLYTIC ENZYMES // CARBOXYLESTERASE 2-RELATED Genomic Order:  3990
Name:  ? AT1G49640 Secondary Identifier:  ? PAC:19655347
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-6303 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G49640 0.5kb upstream 0.5kb upstream 1692 true Chr1: 18375538-18377229 Arabidopsis thaliana
AT1G49640 0.5kb upstream 0.5kb upstream 500 false Chr1: 18376730-18377229 Arabidopsis thaliana
AT1G49640 0.5kb downstream 0.5kb downstream 1692 true Chr1: 18375038-18376729 Arabidopsis thaliana
AT1G49640 0.5kb downstream 0.5kb downstream 500 false Chr1: 18375038-18375537 Arabidopsis thaliana
AT1G49640 1.0kb upstream 1.0kb upstream 2192 true Chr1: 18375538-18377729 Arabidopsis thaliana
AT1G49640 1.0kb upstream 1.0kb upstream 1000 false Chr1: 18376730-18377729 Arabidopsis thaliana
AT1G49640 1.0kb downstream 1.0kb downstream 2192 true Chr1: 18374538-18376729 Arabidopsis thaliana
AT1G49640 1.0kb downstream 1.0kb downstream 1000 false Chr1: 18374538-18375537 Arabidopsis thaliana
AT1G49640 2.0kb upstream 2.0kb upstream 3192 true Chr1: 18375538-18378729 Arabidopsis thaliana
AT1G49640 2.0kb upstream 2.0kb upstream 2000 false Chr1: 18376730-18378729 Arabidopsis thaliana
AT1G49640 2.0kb downstream 2.0kb downstream 3192 true Chr1: 18373538-18376729 Arabidopsis thaliana
AT1G49640 2.0kb downstream 2.0kb downstream 2000 false Chr1: 18373538-18375537 Arabidopsis thaliana
AT1G49640 5.0kb upstream 5.0kb upstream 6192 true Chr1: 18375538-18381729 Arabidopsis thaliana
AT1G49640 5.0kb upstream 5.0kb upstream 5000 false Chr1: 18376730-18381729 Arabidopsis thaliana
AT1G49640 5.0kb downstream 5.0kb downstream 6192 true Chr1: 18370538-18376729 Arabidopsis thaliana
AT1G49640 5.0kb downstream 5.0kb downstream 5000 false Chr1: 18370538-18375537 Arabidopsis thaliana
AT1G49640 10.0kb upstream 10.0kb upstream 11192 true Chr1: 18375538-18386729 Arabidopsis thaliana
AT1G49640 10.0kb upstream 10.0kb upstream 10000 false Chr1: 18376730-18386729 Arabidopsis thaliana
AT1G49640 10.0kb downstream 10.0kb downstream 11192 true Chr1: 18365538-18376729 Arabidopsis thaliana
AT1G49640 10.0kb downstream 10.0kb downstream 10000 false Chr1: 18365538-18375537 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380868 5261 Brassicaceae View MSA
123802942 5264 Brassicales-Malvales View MSA
124300091 5266 SBM View MSA
124151355 5268 Malvidae View MSA
124052112 5270 Rosid View MSA
123751829 5271 Pentapetalae View MSA
122797555 5272 Eudicot View MSA
122051062 5273 Angiosperm View MSA
123428915 5275 Viridiplantae View MSA
121350136 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain