Gene : PER1 A. thaliana TAIR10
Primary Identifier:  ? AT1G48130 Defline:  (1 of 1) K11188 - peroxiredoxin 6, 1-Cys peroxiredoxin (PRDX6)
Genomic Order:  3838 Name:  ? AT1G48130
Secondary Identifier:  ? PAC:19656713
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G48130 0.5kb upstream 0.5kb upstream 1726 true Chr1: 17780002-17781727 Arabidopsis thaliana
AT1G48130 0.5kb upstream 0.5kb upstream 500 false Chr1: 17780002-17780501 Arabidopsis thaliana
AT1G48130 0.5kb downstream 0.5kb downstream 1726 true Chr1: 17780502-17782227 Arabidopsis thaliana
AT1G48130 0.5kb downstream 0.5kb downstream 500 false Chr1: 17781728-17782227 Arabidopsis thaliana
AT1G48130 1.0kb upstream 1.0kb upstream 2226 true Chr1: 17779502-17781727 Arabidopsis thaliana
AT1G48130 1.0kb upstream 1.0kb upstream 1000 false Chr1: 17779502-17780501 Arabidopsis thaliana
AT1G48130 1.0kb downstream 1.0kb downstream 2226 true Chr1: 17780502-17782727 Arabidopsis thaliana
AT1G48130 1.0kb downstream 1.0kb downstream 1000 false Chr1: 17781728-17782727 Arabidopsis thaliana
AT1G48130 2.0kb upstream 2.0kb upstream 3226 true Chr1: 17778502-17781727 Arabidopsis thaliana
AT1G48130 2.0kb upstream 2.0kb upstream 2000 false Chr1: 17778502-17780501 Arabidopsis thaliana
AT1G48130 2.0kb downstream 2.0kb downstream 3226 true Chr1: 17780502-17783727 Arabidopsis thaliana
AT1G48130 2.0kb downstream 2.0kb downstream 2000 false Chr1: 17781728-17783727 Arabidopsis thaliana
AT1G48130 5.0kb upstream 5.0kb upstream 6226 true Chr1: 17775502-17781727 Arabidopsis thaliana
AT1G48130 5.0kb upstream 5.0kb upstream 5000 false Chr1: 17775502-17780501 Arabidopsis thaliana
AT1G48130 5.0kb downstream 5.0kb downstream 6226 true Chr1: 17780502-17786727 Arabidopsis thaliana
AT1G48130 5.0kb downstream 5.0kb downstream 5000 false Chr1: 17781728-17786727 Arabidopsis thaliana
AT1G48130 10.0kb upstream 10.0kb upstream 11226 true Chr1: 17770502-17781727 Arabidopsis thaliana
AT1G48130 10.0kb upstream 10.0kb upstream 10000 false Chr1: 17770502-17780501 Arabidopsis thaliana
AT1G48130 10.0kb downstream 10.0kb downstream 11226 true Chr1: 17780502-17791727 Arabidopsis thaliana
AT1G48130 10.0kb downstream 10.0kb downstream 10000 false Chr1: 17781728-17791727 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363570 5261 Brassicaceae View MSA
123833065 5264 Brassicales-Malvales View MSA
124339944 5266 SBM View MSA
124238877 5268 Malvidae View MSA
124061141 5270 Rosid View MSA
123736467 5271 Pentapetalae View MSA
122793641 5272 Eudicot View MSA
122043064 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121347390 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain