Gene : TGA3 A. thaliana TAIR10
Primary Identifier:  ? AT1G22070 Defline:  (1 of 2) PTHR22952//PTHR22952:SF203 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED // TRANSCRIPTION FACTOR TGA3-RELATED
Genomic Order:  2234 Name:  ? AT1G22070
Secondary Identifier:  ? PAC:19649514
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G22070 0.5kb upstream 0.5kb upstream 3267 true Chr1: 7788848-7792114 Arabidopsis thaliana
AT1G22070 0.5kb upstream 0.5kb upstream 500 false Chr1: 7788848-7789347 Arabidopsis thaliana
AT1G22070 0.5kb downstream 0.5kb downstream 3267 true Chr1: 7789348-7792614 Arabidopsis thaliana
AT1G22070 0.5kb downstream 0.5kb downstream 500 false Chr1: 7792115-7792614 Arabidopsis thaliana
AT1G22070 1.0kb upstream 1.0kb upstream 3767 true Chr1: 7788348-7792114 Arabidopsis thaliana
AT1G22070 1.0kb upstream 1.0kb upstream 1000 false Chr1: 7788348-7789347 Arabidopsis thaliana
AT1G22070 1.0kb downstream 1.0kb downstream 3767 true Chr1: 7789348-7793114 Arabidopsis thaliana
AT1G22070 1.0kb downstream 1.0kb downstream 1000 false Chr1: 7792115-7793114 Arabidopsis thaliana
AT1G22070 2.0kb upstream 2.0kb upstream 4767 true Chr1: 7787348-7792114 Arabidopsis thaliana
AT1G22070 2.0kb upstream 2.0kb upstream 2000 false Chr1: 7787348-7789347 Arabidopsis thaliana
AT1G22070 2.0kb downstream 2.0kb downstream 4767 true Chr1: 7789348-7794114 Arabidopsis thaliana
AT1G22070 2.0kb downstream 2.0kb downstream 2000 false Chr1: 7792115-7794114 Arabidopsis thaliana
AT1G22070 5.0kb upstream 5.0kb upstream 7767 true Chr1: 7784348-7792114 Arabidopsis thaliana
AT1G22070 5.0kb upstream 5.0kb upstream 5000 false Chr1: 7784348-7789347 Arabidopsis thaliana
AT1G22070 5.0kb downstream 5.0kb downstream 7767 true Chr1: 7789348-7797114 Arabidopsis thaliana
AT1G22070 5.0kb downstream 5.0kb downstream 5000 false Chr1: 7792115-7797114 Arabidopsis thaliana
AT1G22070 10.0kb upstream 10.0kb upstream 12767 true Chr1: 7779348-7792114 Arabidopsis thaliana
AT1G22070 10.0kb upstream 10.0kb upstream 10000 false Chr1: 7779348-7789347 Arabidopsis thaliana
AT1G22070 10.0kb downstream 10.0kb downstream 12767 true Chr1: 7789348-7802114 Arabidopsis thaliana
AT1G22070 10.0kb downstream 10.0kb downstream 10000 false Chr1: 7792115-7802114 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370221 5261 Brassicaceae View MSA
123838998 5264 Brassicales-Malvales View MSA
124351040 5266 SBM View MSA
124237534 5268 Malvidae View MSA
124071998 5270 Rosid View MSA
123743683 5271 Pentapetalae View MSA
122792849 5272 Eudicot View MSA
122045464 5273 Angiosperm View MSA
121310452 5274 Embryophyte View MSA
123347930 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.091        
cufflinks 22.841        
cufflinks 21.32        
cufflinks 26.272        
cufflinks 27.102     High  
cufflinks 16.168       Low

0 Strain