Gene : SRS7 A. thaliana TAIR10
Primary Identifier:  ? AT1G19790 Defline:  (1 of 5) PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED
Genomic Order:  1992 Name:  ? AT1G19790
Secondary Identifier:  ? PAC:19652758
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G19790 0.5kb upstream 0.5kb upstream 2674 true Chr1: 6838120-6840793 Arabidopsis thaliana
AT1G19790 0.5kb upstream 0.5kb upstream 500 false Chr1: 6840294-6840793 Arabidopsis thaliana
AT1G19790 0.5kb downstream 0.5kb downstream 2674 true Chr1: 6837620-6840293 Arabidopsis thaliana
AT1G19790 0.5kb downstream 0.5kb downstream 500 false Chr1: 6837620-6838119 Arabidopsis thaliana
AT1G19790 1.0kb upstream 1.0kb upstream 3174 true Chr1: 6838120-6841293 Arabidopsis thaliana
AT1G19790 1.0kb upstream 1.0kb upstream 1000 false Chr1: 6840294-6841293 Arabidopsis thaliana
AT1G19790 1.0kb downstream 1.0kb downstream 3174 true Chr1: 6837120-6840293 Arabidopsis thaliana
AT1G19790 1.0kb downstream 1.0kb downstream 1000 false Chr1: 6837120-6838119 Arabidopsis thaliana
AT1G19790 2.0kb upstream 2.0kb upstream 4174 true Chr1: 6838120-6842293 Arabidopsis thaliana
AT1G19790 2.0kb upstream 2.0kb upstream 2000 false Chr1: 6840294-6842293 Arabidopsis thaliana
AT1G19790 2.0kb downstream 2.0kb downstream 4174 true Chr1: 6836120-6840293 Arabidopsis thaliana
AT1G19790 2.0kb downstream 2.0kb downstream 2000 false Chr1: 6836120-6838119 Arabidopsis thaliana
AT1G19790 5.0kb upstream 5.0kb upstream 7174 true Chr1: 6838120-6845293 Arabidopsis thaliana
AT1G19790 5.0kb upstream 5.0kb upstream 5000 false Chr1: 6840294-6845293 Arabidopsis thaliana
AT1G19790 5.0kb downstream 5.0kb downstream 7174 true Chr1: 6833120-6840293 Arabidopsis thaliana
AT1G19790 5.0kb downstream 5.0kb downstream 5000 false Chr1: 6833120-6838119 Arabidopsis thaliana
AT1G19790 10.0kb upstream 10.0kb upstream 12174 true Chr1: 6838120-6850293 Arabidopsis thaliana
AT1G19790 10.0kb upstream 10.0kb upstream 10000 false Chr1: 6840294-6850293 Arabidopsis thaliana
AT1G19790 10.0kb downstream 10.0kb downstream 12174 true Chr1: 6828120-6840293 Arabidopsis thaliana
AT1G19790 10.0kb downstream 10.0kb downstream 10000 false Chr1: 6828120-6838119 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366901 5261 Brassicaceae View MSA
123838633 5264 Brassicales-Malvales View MSA
124340064 5266 SBM View MSA
124251663 5268 Malvidae View MSA
124067577 5270 Rosid View MSA
123749314 5271 Pentapetalae View MSA
122796752 5272 Eudicot View MSA
122049669 5273 Angiosperm View MSA
121344202 5274 Embryophyte View MSA
123379999 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.043     Low Low
cufflinks 1.135       High
cufflinks 0.069     Low  
cufflinks 1.477       High
cufflinks 0.057     Low  
cufflinks 0.471        

0 Strain