Gene : AT1G19660 A. thaliana TAIR10
Defline:  (1 of 2) PTHR15160:SF3 - BIFUNCTIONAL NUCLEASE 1-RELATED Genomic Order:  1979
Name:  ? AT1G19660 Secondary Identifier:  ? PAC:19656961
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G19660 0.5kb upstream 0.5kb upstream 3205 true Chr1: 6799981-6803185 Arabidopsis thaliana
AT1G19660 0.5kb upstream 0.5kb upstream 500 false Chr1: 6802686-6803185 Arabidopsis thaliana
AT1G19660 0.5kb downstream 0.5kb downstream 3205 true Chr1: 6799481-6802685 Arabidopsis thaliana
AT1G19660 0.5kb downstream 0.5kb downstream 500 false Chr1: 6799481-6799980 Arabidopsis thaliana
AT1G19660 1.0kb upstream 1.0kb upstream 3705 true Chr1: 6799981-6803685 Arabidopsis thaliana
AT1G19660 1.0kb upstream 1.0kb upstream 1000 false Chr1: 6802686-6803685 Arabidopsis thaliana
AT1G19660 1.0kb downstream 1.0kb downstream 3705 true Chr1: 6798981-6802685 Arabidopsis thaliana
AT1G19660 1.0kb downstream 1.0kb downstream 1000 false Chr1: 6798981-6799980 Arabidopsis thaliana
AT1G19660 2.0kb upstream 2.0kb upstream 4705 true Chr1: 6799981-6804685 Arabidopsis thaliana
AT1G19660 2.0kb upstream 2.0kb upstream 2000 false Chr1: 6802686-6804685 Arabidopsis thaliana
AT1G19660 2.0kb downstream 2.0kb downstream 4705 true Chr1: 6797981-6802685 Arabidopsis thaliana
AT1G19660 2.0kb downstream 2.0kb downstream 2000 false Chr1: 6797981-6799980 Arabidopsis thaliana
AT1G19660 5.0kb upstream 5.0kb upstream 7705 true Chr1: 6799981-6807685 Arabidopsis thaliana
AT1G19660 5.0kb upstream 5.0kb upstream 5000 false Chr1: 6802686-6807685 Arabidopsis thaliana
AT1G19660 5.0kb downstream 5.0kb downstream 7705 true Chr1: 6794981-6802685 Arabidopsis thaliana
AT1G19660 5.0kb downstream 5.0kb downstream 5000 false Chr1: 6794981-6799980 Arabidopsis thaliana
AT1G19660 10.0kb upstream 10.0kb upstream 12705 true Chr1: 6799981-6812685 Arabidopsis thaliana
AT1G19660 10.0kb upstream 10.0kb upstream 10000 false Chr1: 6802686-6812685 Arabidopsis thaliana
AT1G19660 10.0kb downstream 10.0kb downstream 12705 true Chr1: 6789981-6802685 Arabidopsis thaliana
AT1G19660 10.0kb downstream 10.0kb downstream 10000 false Chr1: 6789981-6799980 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380470 5261 Brassicaceae View MSA
123833088 5264 Brassicales-Malvales View MSA
124345202 5266 SBM View MSA
124242607 5268 Malvidae View MSA
124063334 5270 Rosid View MSA
123751879 5271 Pentapetalae View MSA
122794039 5272 Eudicot View MSA
122042536 5273 Angiosperm View MSA
121348555 5274 Embryophyte View MSA
123425976 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.99     High  
cufflinks 8.044        
cufflinks 35.743     High  
cufflinks 12.294        
cufflinks 49.806     High High
cufflinks 4.228       Low

0 Strain