Gene : EPR1 A. thaliana TAIR10
Primary Identifier:  ? AT1G18330 Defline:  (1 of 2) PTHR12802//PTHR12802:SF37 - SWI/SNF COMPLEX-RELATED // PROTEIN REVEILLE 7-LIKE
Genomic Order:  1843 Name:  ? AT1G18330
Secondary Identifier:  ? PAC:19652283
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G18330 0.5kb upstream 0.5kb upstream 2548 true Chr1: 6305966-6308513 Arabidopsis thaliana
AT1G18330 0.5kb upstream 0.5kb upstream 500 false Chr1: 6308014-6308513 Arabidopsis thaliana
AT1G18330 0.5kb downstream 0.5kb downstream 2548 true Chr1: 6305466-6308013 Arabidopsis thaliana
AT1G18330 0.5kb downstream 0.5kb downstream 500 false Chr1: 6305466-6305965 Arabidopsis thaliana
AT1G18330 1.0kb upstream 1.0kb upstream 3048 true Chr1: 6305966-6309013 Arabidopsis thaliana
AT1G18330 1.0kb upstream 1.0kb upstream 1000 false Chr1: 6308014-6309013 Arabidopsis thaliana
AT1G18330 1.0kb downstream 1.0kb downstream 3048 true Chr1: 6304966-6308013 Arabidopsis thaliana
AT1G18330 1.0kb downstream 1.0kb downstream 1000 false Chr1: 6304966-6305965 Arabidopsis thaliana
AT1G18330 2.0kb upstream 2.0kb upstream 4048 true Chr1: 6305966-6310013 Arabidopsis thaliana
AT1G18330 2.0kb upstream 2.0kb upstream 2000 false Chr1: 6308014-6310013 Arabidopsis thaliana
AT1G18330 2.0kb downstream 2.0kb downstream 4048 true Chr1: 6303966-6308013 Arabidopsis thaliana
AT1G18330 2.0kb downstream 2.0kb downstream 2000 false Chr1: 6303966-6305965 Arabidopsis thaliana
AT1G18330 5.0kb upstream 5.0kb upstream 7048 true Chr1: 6305966-6313013 Arabidopsis thaliana
AT1G18330 5.0kb upstream 5.0kb upstream 5000 false Chr1: 6308014-6313013 Arabidopsis thaliana
AT1G18330 5.0kb downstream 5.0kb downstream 7048 true Chr1: 6300966-6308013 Arabidopsis thaliana
AT1G18330 5.0kb downstream 5.0kb downstream 5000 false Chr1: 6300966-6305965 Arabidopsis thaliana
AT1G18330 10.0kb upstream 10.0kb upstream 12048 true Chr1: 6305966-6318013 Arabidopsis thaliana
AT1G18330 10.0kb upstream 10.0kb upstream 10000 false Chr1: 6308014-6318013 Arabidopsis thaliana
AT1G18330 10.0kb downstream 10.0kb downstream 12048 true Chr1: 6295966-6308013 Arabidopsis thaliana
AT1G18330 10.0kb downstream 10.0kb downstream 10000 false Chr1: 6295966-6305965 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371365 5261 Brassicaceae View MSA
123800150 5264 Brassicales-Malvales View MSA
124347830 5266 SBM View MSA
124252836 5268 Malvidae View MSA
124069733 5270 Rosid View MSA
123742817 5271 Pentapetalae View MSA
122794763 5272 Eudicot View MSA
122048957 5273 Angiosperm View MSA
121311186 5274 Embryophyte View MSA
123427162 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.519       Low
cufflinks 2.248        
cufflinks 1.038        
cufflinks 3.72       High
cufflinks 1.66        
cufflinks 1.704        

0 Strain