Gene : GAPCP-1 A. thaliana TAIR10
Primary Identifier:  ? AT1G79530 Defline:  (1 of 2) PTHR10836//PTHR10836:SF46 - GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE // SUBFAMILY NOT NAMED
Genomic Order:  6930 Name:  ? AT1G79530
Secondary Identifier:  ? PAC:19653661
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Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana ANAEROFRUCAT-PWY Arabidopsis thaliana pathologic  
Athaliana ANAGLYCOLYSIS-PWY Arabidopsis thaliana pathologic  
Athaliana GLUCONEO-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-1042 Arabidopsis thaliana pathologic  
Athaliana PWY-5464 Arabidopsis thaliana pathologic  
Athaliana PWY66-399 Arabidopsis thaliana pathologic  
Athaliana SUCSYN-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G79530 0.5kb upstream 0.5kb upstream 3833 true Chr1: 29915902-29919734 Arabidopsis thaliana
AT1G79530 0.5kb upstream 0.5kb upstream 500 false Chr1: 29919235-29919734 Arabidopsis thaliana
AT1G79530 0.5kb downstream 0.5kb downstream 3833 true Chr1: 29915402-29919234 Arabidopsis thaliana
AT1G79530 0.5kb downstream 0.5kb downstream 500 false Chr1: 29915402-29915901 Arabidopsis thaliana
AT1G79530 1.0kb upstream 1.0kb upstream 4333 true Chr1: 29915902-29920234 Arabidopsis thaliana
AT1G79530 1.0kb upstream 1.0kb upstream 1000 false Chr1: 29919235-29920234 Arabidopsis thaliana
AT1G79530 1.0kb downstream 1.0kb downstream 4333 true Chr1: 29914902-29919234 Arabidopsis thaliana
AT1G79530 1.0kb downstream 1.0kb downstream 1000 false Chr1: 29914902-29915901 Arabidopsis thaliana
AT1G79530 2.0kb upstream 2.0kb upstream 5333 true Chr1: 29915902-29921234 Arabidopsis thaliana
AT1G79530 2.0kb upstream 2.0kb upstream 2000 false Chr1: 29919235-29921234 Arabidopsis thaliana
AT1G79530 2.0kb downstream 2.0kb downstream 5333 true Chr1: 29913902-29919234 Arabidopsis thaliana
AT1G79530 2.0kb downstream 2.0kb downstream 2000 false Chr1: 29913902-29915901 Arabidopsis thaliana
AT1G79530 5.0kb upstream 5.0kb upstream 8333 true Chr1: 29915902-29924234 Arabidopsis thaliana
AT1G79530 5.0kb upstream 5.0kb upstream 5000 false Chr1: 29919235-29924234 Arabidopsis thaliana
AT1G79530 5.0kb downstream 5.0kb downstream 8333 true Chr1: 29910902-29919234 Arabidopsis thaliana
AT1G79530 5.0kb downstream 5.0kb downstream 5000 false Chr1: 29910902-29915901 Arabidopsis thaliana
AT1G79530 10.0kb upstream 10.0kb upstream 13333 true Chr1: 29915902-29929234 Arabidopsis thaliana
AT1G79530 10.0kb upstream 10.0kb upstream 10000 false Chr1: 29919235-29929234 Arabidopsis thaliana
AT1G79530 10.0kb downstream 10.0kb downstream 13333 true Chr1: 29905902-29919234 Arabidopsis thaliana
AT1G79530 10.0kb downstream 10.0kb downstream 10000 false Chr1: 29905902-29915901 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360687 5261 Brassicaceae View MSA
123836882 5264 Brassicales-Malvales View MSA
124346127 5266 SBM View MSA
124243370 5268 Malvidae View MSA
124063810 5270 Rosid View MSA
123738168 5271 Pentapetalae View MSA
122792653 5272 Eudicot View MSA
122042179 5273 Angiosperm View MSA
121345581 5274 Embryophyte View MSA
123425180 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.933        
cufflinks 58.361     High  
cufflinks 4.225       Low
cufflinks 74.918     High  
cufflinks 5.734        
cufflinks 72.142     High  

0 Strain