Gene : RFC3 A. thaliana TAIR10
Primary Identifier:  ? AT1G77470 Defline:  (1 of 1) PTHR11669:SF9 - REPLICATION FACTOR C SUBUNIT 5
Genomic Order:  6717 Name:  ? AT1G77470
Secondary Identifier:  ? PAC:19651054
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G77470 0.5kb upstream 0.5kb upstream 2988 true Chr1: 29111948-29114935 Arabidopsis thaliana
AT1G77470 0.5kb upstream 0.5kb upstream 500 false Chr1: 29114436-29114935 Arabidopsis thaliana
AT1G77470 0.5kb downstream 0.5kb downstream 2988 true Chr1: 29111448-29114435 Arabidopsis thaliana
AT1G77470 0.5kb downstream 0.5kb downstream 500 false Chr1: 29111448-29111947 Arabidopsis thaliana
AT1G77470 1.0kb upstream 1.0kb upstream 3488 true Chr1: 29111948-29115435 Arabidopsis thaliana
AT1G77470 1.0kb upstream 1.0kb upstream 1000 false Chr1: 29114436-29115435 Arabidopsis thaliana
AT1G77470 1.0kb downstream 1.0kb downstream 3488 true Chr1: 29110948-29114435 Arabidopsis thaliana
AT1G77470 1.0kb downstream 1.0kb downstream 1000 false Chr1: 29110948-29111947 Arabidopsis thaliana
AT1G77470 2.0kb upstream 2.0kb upstream 4488 true Chr1: 29111948-29116435 Arabidopsis thaliana
AT1G77470 2.0kb upstream 2.0kb upstream 2000 false Chr1: 29114436-29116435 Arabidopsis thaliana
AT1G77470 2.0kb downstream 2.0kb downstream 4488 true Chr1: 29109948-29114435 Arabidopsis thaliana
AT1G77470 2.0kb downstream 2.0kb downstream 2000 false Chr1: 29109948-29111947 Arabidopsis thaliana
AT1G77470 5.0kb upstream 5.0kb upstream 7488 true Chr1: 29111948-29119435 Arabidopsis thaliana
AT1G77470 5.0kb upstream 5.0kb upstream 5000 false Chr1: 29114436-29119435 Arabidopsis thaliana
AT1G77470 5.0kb downstream 5.0kb downstream 7488 true Chr1: 29106948-29114435 Arabidopsis thaliana
AT1G77470 5.0kb downstream 5.0kb downstream 5000 false Chr1: 29106948-29111947 Arabidopsis thaliana
AT1G77470 10.0kb upstream 10.0kb upstream 12488 true Chr1: 29111948-29124435 Arabidopsis thaliana
AT1G77470 10.0kb upstream 10.0kb upstream 10000 false Chr1: 29114436-29124435 Arabidopsis thaliana
AT1G77470 10.0kb downstream 10.0kb downstream 12488 true Chr1: 29101948-29114435 Arabidopsis thaliana
AT1G77470 10.0kb downstream 10.0kb downstream 10000 false Chr1: 29101948-29111947 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367373 5261 Brassicaceae View MSA
123831590 5264 Brassicales-Malvales View MSA
124343041 5266 SBM View MSA
124240634 5268 Malvidae View MSA
124063888 5270 Rosid View MSA
123738354 5271 Pentapetalae View MSA
122793599 5272 Eudicot View MSA
122045152 5273 Angiosperm View MSA
121344274 5274 Embryophyte View MSA
123424030 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.721        
cufflinks 9.185        
cufflinks 4.078       Low
cufflinks 9.643        
cufflinks 3.886       Low
cufflinks 8.582        

0 Strain