Gene : AT1G77370 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10168//PTHR10168:SF116 - GLUTAREDOXIN // GLUTAREDOXIN-C3 Genomic Order:  6707
Name:  ? AT1G77370 Secondary Identifier:  ? PAC:19653209
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana THIOREDOX-PWY Arabidopsis thaliana pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G77370 0.5kb upstream 0.5kb upstream 1454 true Chr1: 29073343-29074796 Arabidopsis thaliana
AT1G77370 0.5kb upstream 0.5kb upstream 500 false Chr1: 29073343-29073842 Arabidopsis thaliana
AT1G77370 0.5kb downstream 0.5kb downstream 1454 true Chr1: 29073843-29075296 Arabidopsis thaliana
AT1G77370 0.5kb downstream 0.5kb downstream 500 false Chr1: 29074797-29075296 Arabidopsis thaliana
AT1G77370 1.0kb upstream 1.0kb upstream 1954 true Chr1: 29072843-29074796 Arabidopsis thaliana
AT1G77370 1.0kb upstream 1.0kb upstream 1000 false Chr1: 29072843-29073842 Arabidopsis thaliana
AT1G77370 1.0kb downstream 1.0kb downstream 1954 true Chr1: 29073843-29075796 Arabidopsis thaliana
AT1G77370 1.0kb downstream 1.0kb downstream 1000 false Chr1: 29074797-29075796 Arabidopsis thaliana
AT1G77370 2.0kb upstream 2.0kb upstream 2954 true Chr1: 29071843-29074796 Arabidopsis thaliana
AT1G77370 2.0kb upstream 2.0kb upstream 2000 false Chr1: 29071843-29073842 Arabidopsis thaliana
AT1G77370 2.0kb downstream 2.0kb downstream 2954 true Chr1: 29073843-29076796 Arabidopsis thaliana
AT1G77370 2.0kb downstream 2.0kb downstream 2000 false Chr1: 29074797-29076796 Arabidopsis thaliana
AT1G77370 5.0kb upstream 5.0kb upstream 5954 true Chr1: 29068843-29074796 Arabidopsis thaliana
AT1G77370 5.0kb upstream 5.0kb upstream 5000 false Chr1: 29068843-29073842 Arabidopsis thaliana
AT1G77370 5.0kb downstream 5.0kb downstream 5954 true Chr1: 29073843-29079796 Arabidopsis thaliana
AT1G77370 5.0kb downstream 5.0kb downstream 5000 false Chr1: 29074797-29079796 Arabidopsis thaliana
AT1G77370 10.0kb upstream 10.0kb upstream 10954 true Chr1: 29063843-29074796 Arabidopsis thaliana
AT1G77370 10.0kb upstream 10.0kb upstream 10000 false Chr1: 29063843-29073842 Arabidopsis thaliana
AT1G77370 10.0kb downstream 10.0kb downstream 10954 true Chr1: 29073843-29084796 Arabidopsis thaliana
AT1G77370 10.0kb downstream 10.0kb downstream 10000 false Chr1: 29074797-29084796 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362973 5261 Brassicaceae View MSA
123832180 5264 Brassicales-Malvales View MSA
124338422 5266 SBM View MSA
124237581 5268 Malvidae View MSA
124064046 5270 Rosid View MSA
123741506 5271 Pentapetalae View MSA
122793687 5272 Eudicot View MSA
122043796 5273 Angiosperm View MSA
121344746 5274 Embryophyte View MSA
123428660 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 40.439     High  
cufflinks 56.639     High High
cufflinks 34.434     High Low
cufflinks 49.198     High  
cufflinks 39.038     High  
cufflinks 43.667     High  

0 Strain