Gene : AT1G76640 A. thaliana TAIR10
Defline:  (1 of 2) PTHR10891:SF592 - CALCIUM-BINDING PROTEIN CML38-RELATED Genomic Order:  6628
Name:  ? AT1G76640 Secondary Identifier:  ? PAC:19653390
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G76640 0.5kb upstream 0.5kb upstream 980 true Chr1: 28765324-28766303 Arabidopsis thaliana
AT1G76640 0.5kb upstream 0.5kb upstream 500 false Chr1: 28765804-28766303 Arabidopsis thaliana
AT1G76640 0.5kb downstream 0.5kb downstream 980 true Chr1: 28764824-28765803 Arabidopsis thaliana
AT1G76640 0.5kb downstream 0.5kb downstream 500 false Chr1: 28764824-28765323 Arabidopsis thaliana
AT1G76640 1.0kb upstream 1.0kb upstream 1480 true Chr1: 28765324-28766803 Arabidopsis thaliana
AT1G76640 1.0kb upstream 1.0kb upstream 1000 false Chr1: 28765804-28766803 Arabidopsis thaliana
AT1G76640 1.0kb downstream 1.0kb downstream 1480 true Chr1: 28764324-28765803 Arabidopsis thaliana
AT1G76640 1.0kb downstream 1.0kb downstream 1000 false Chr1: 28764324-28765323 Arabidopsis thaliana
AT1G76640 2.0kb upstream 2.0kb upstream 2480 true Chr1: 28765324-28767803 Arabidopsis thaliana
AT1G76640 2.0kb upstream 2.0kb upstream 2000 false Chr1: 28765804-28767803 Arabidopsis thaliana
AT1G76640 2.0kb downstream 2.0kb downstream 2480 true Chr1: 28763324-28765803 Arabidopsis thaliana
AT1G76640 2.0kb downstream 2.0kb downstream 2000 false Chr1: 28763324-28765323 Arabidopsis thaliana
AT1G76640 5.0kb upstream 5.0kb upstream 5480 true Chr1: 28765324-28770803 Arabidopsis thaliana
AT1G76640 5.0kb upstream 5.0kb upstream 5000 false Chr1: 28765804-28770803 Arabidopsis thaliana
AT1G76640 5.0kb downstream 5.0kb downstream 5480 true Chr1: 28760324-28765803 Arabidopsis thaliana
AT1G76640 5.0kb downstream 5.0kb downstream 5000 false Chr1: 28760324-28765323 Arabidopsis thaliana
AT1G76640 10.0kb upstream 10.0kb upstream 10480 true Chr1: 28765324-28775803 Arabidopsis thaliana
AT1G76640 10.0kb upstream 10.0kb upstream 10000 false Chr1: 28765804-28775803 Arabidopsis thaliana
AT1G76640 10.0kb downstream 10.0kb downstream 10480 true Chr1: 28755324-28765803 Arabidopsis thaliana
AT1G76640 10.0kb downstream 10.0kb downstream 10000 false Chr1: 28755324-28765323 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365197 5261 Brassicaceae View MSA
123837408 5264 Brassicales-Malvales View MSA
124348186 5266 SBM View MSA
124254002 5268 Malvidae View MSA
124071613 5270 Rosid View MSA
123747964 5271 Pentapetalae View MSA
122795822 5272 Eudicot View MSA
122046502 5273 Angiosperm View MSA
121351910 5274 Embryophyte View MSA
123382405 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.584       Low
cufflinks 37.178     High  
cufflinks 1.143        
cufflinks 21.069        
cufflinks 0.639        
cufflinks 54.911     High High

0 Strain