Gene : SMT3 A. thaliana TAIR10
Primary Identifier:  ? AT1G76090 Defline:  (1 of 2) 2.1.1.142//2.1.1.143 - Cycloartenol 24-C-methyltransferase / Sterol C-methyltransferase // 24-methylenesterol C-methyltransferase / SMT(2)
Genomic Order:  6572 Name:  ? AT1G76090
Secondary Identifier:  ? PAC:19656624
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-2541 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G76090 0.5kb upstream 0.5kb upstream 1873 true Chr1: 28550409-28552281 Arabidopsis thaliana
AT1G76090 0.5kb upstream 0.5kb upstream 500 false Chr1: 28551782-28552281 Arabidopsis thaliana
AT1G76090 0.5kb downstream 0.5kb downstream 1873 true Chr1: 28549909-28551781 Arabidopsis thaliana
AT1G76090 0.5kb downstream 0.5kb downstream 500 false Chr1: 28549909-28550408 Arabidopsis thaliana
AT1G76090 1.0kb upstream 1.0kb upstream 2373 true Chr1: 28550409-28552781 Arabidopsis thaliana
AT1G76090 1.0kb upstream 1.0kb upstream 1000 false Chr1: 28551782-28552781 Arabidopsis thaliana
AT1G76090 1.0kb downstream 1.0kb downstream 2373 true Chr1: 28549409-28551781 Arabidopsis thaliana
AT1G76090 1.0kb downstream 1.0kb downstream 1000 false Chr1: 28549409-28550408 Arabidopsis thaliana
AT1G76090 2.0kb upstream 2.0kb upstream 3373 true Chr1: 28550409-28553781 Arabidopsis thaliana
AT1G76090 2.0kb upstream 2.0kb upstream 2000 false Chr1: 28551782-28553781 Arabidopsis thaliana
AT1G76090 2.0kb downstream 2.0kb downstream 3373 true Chr1: 28548409-28551781 Arabidopsis thaliana
AT1G76090 2.0kb downstream 2.0kb downstream 2000 false Chr1: 28548409-28550408 Arabidopsis thaliana
AT1G76090 5.0kb upstream 5.0kb upstream 6373 true Chr1: 28550409-28556781 Arabidopsis thaliana
AT1G76090 5.0kb upstream 5.0kb upstream 5000 false Chr1: 28551782-28556781 Arabidopsis thaliana
AT1G76090 5.0kb downstream 5.0kb downstream 6373 true Chr1: 28545409-28551781 Arabidopsis thaliana
AT1G76090 5.0kb downstream 5.0kb downstream 5000 false Chr1: 28545409-28550408 Arabidopsis thaliana
AT1G76090 10.0kb upstream 10.0kb upstream 11373 true Chr1: 28550409-28561781 Arabidopsis thaliana
AT1G76090 10.0kb upstream 10.0kb upstream 10000 false Chr1: 28551782-28561781 Arabidopsis thaliana
AT1G76090 10.0kb downstream 10.0kb downstream 11373 true Chr1: 28540409-28551781 Arabidopsis thaliana
AT1G76090 10.0kb downstream 10.0kb downstream 10000 false Chr1: 28540409-28550408 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362317 5261 Brassicaceae View MSA
123838887 5264 Brassicales-Malvales View MSA
124346490 5266 SBM View MSA
124253905 5268 Malvidae View MSA
124062821 5270 Rosid View MSA
123749878 5271 Pentapetalae View MSA
122793633 5272 Eudicot View MSA
122047271 5273 Angiosperm View MSA
121344259 5274 Embryophyte View MSA
123426805 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.285     High  
cufflinks 26.227        
cufflinks 18.714       Low
cufflinks 39.715     High  
cufflinks 20.178        
cufflinks 59.434     High High

0 Strain