Gene : PP2-B1 A. thaliana TAIR10
Primary Identifier:  ? AT2G02230 Defline:  (1 of 8) PF00646//PF14299 - F-box domain (F-box) // Phloem protein 2 (PP2)
Genomic Order:  129 Name:  ? AT2G02230
Secondary Identifier:  ? PAC:19641831
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G02230 0.5kb upstream 0.5kb upstream 1930 true Chr2: 590221-592150 Arabidopsis thaliana
AT2G02230 0.5kb upstream 0.5kb upstream 500 false Chr2: 591651-592150 Arabidopsis thaliana
AT2G02230 0.5kb downstream 0.5kb downstream 1930 true Chr2: 589721-591650 Arabidopsis thaliana
AT2G02230 0.5kb downstream 0.5kb downstream 500 false Chr2: 589721-590220 Arabidopsis thaliana
AT2G02230 1.0kb upstream 1.0kb upstream 2430 true Chr2: 590221-592650 Arabidopsis thaliana
AT2G02230 1.0kb upstream 1.0kb upstream 1000 false Chr2: 591651-592650 Arabidopsis thaliana
AT2G02230 1.0kb downstream 1.0kb downstream 2430 true Chr2: 589221-591650 Arabidopsis thaliana
AT2G02230 1.0kb downstream 1.0kb downstream 1000 false Chr2: 589221-590220 Arabidopsis thaliana
AT2G02230 2.0kb upstream 2.0kb upstream 3430 true Chr2: 590221-593650 Arabidopsis thaliana
AT2G02230 2.0kb upstream 2.0kb upstream 2000 false Chr2: 591651-593650 Arabidopsis thaliana
AT2G02230 2.0kb downstream 2.0kb downstream 3430 true Chr2: 588221-591650 Arabidopsis thaliana
AT2G02230 2.0kb downstream 2.0kb downstream 2000 false Chr2: 588221-590220 Arabidopsis thaliana
AT2G02230 5.0kb upstream 5.0kb upstream 6430 true Chr2: 590221-596650 Arabidopsis thaliana
AT2G02230 5.0kb upstream 5.0kb upstream 5000 false Chr2: 591651-596650 Arabidopsis thaliana
AT2G02230 5.0kb downstream 5.0kb downstream 6430 true Chr2: 585221-591650 Arabidopsis thaliana
AT2G02230 5.0kb downstream 5.0kb downstream 5000 false Chr2: 585221-590220 Arabidopsis thaliana
AT2G02230 10.0kb upstream 10.0kb upstream 11430 true Chr2: 590221-601650 Arabidopsis thaliana
AT2G02230 10.0kb upstream 10.0kb upstream 10000 false Chr2: 591651-601650 Arabidopsis thaliana
AT2G02230 10.0kb downstream 10.0kb downstream 11430 true Chr2: 580221-591650 Arabidopsis thaliana
AT2G02230 10.0kb downstream 10.0kb downstream 10000 false Chr2: 580221-590220 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374912 5261 Brassicaceae View MSA
123839830 5264 Brassicales-Malvales View MSA
124344863 5266 SBM View MSA
124251424 5268 Malvidae View MSA
124073943 5270 Rosid View MSA
123752990 5271 Pentapetalae View MSA
122797907 5272 Eudicot View MSA
122050927 5273 Angiosperm View MSA
121349666 5274 Embryophyte View MSA
123381391 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.372        
cufflinks 30.87     High High
cufflinks 6.738        
cufflinks 19.015        
cufflinks 5.898       Low
cufflinks 28.354       High

0 Strain