Gene : PIN4 A. thaliana TAIR10
Primary Identifier:  ? AT2G01420 Defline:  (1 of 8) K13947 - auxin efflux carrier family (PIN)
Genomic Order:  40 Name:  ? AT2G01420
Secondary Identifier:  ? PAC:19642137
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G01420 0.5kb upstream 0.5kb upstream 3724 true Chr2: 180105-183828 Arabidopsis thaliana
AT2G01420 0.5kb upstream 0.5kb upstream 500 false Chr2: 183329-183828 Arabidopsis thaliana
AT2G01420 0.5kb downstream 0.5kb downstream 3724 true Chr2: 179605-183328 Arabidopsis thaliana
AT2G01420 0.5kb downstream 0.5kb downstream 500 false Chr2: 179605-180104 Arabidopsis thaliana
AT2G01420 1.0kb upstream 1.0kb upstream 4224 true Chr2: 180105-184328 Arabidopsis thaliana
AT2G01420 1.0kb upstream 1.0kb upstream 1000 false Chr2: 183329-184328 Arabidopsis thaliana
AT2G01420 1.0kb downstream 1.0kb downstream 4224 true Chr2: 179105-183328 Arabidopsis thaliana
AT2G01420 1.0kb downstream 1.0kb downstream 1000 false Chr2: 179105-180104 Arabidopsis thaliana
AT2G01420 2.0kb upstream 2.0kb upstream 5224 true Chr2: 180105-185328 Arabidopsis thaliana
AT2G01420 2.0kb upstream 2.0kb upstream 2000 false Chr2: 183329-185328 Arabidopsis thaliana
AT2G01420 2.0kb downstream 2.0kb downstream 5224 true Chr2: 178105-183328 Arabidopsis thaliana
AT2G01420 2.0kb downstream 2.0kb downstream 2000 false Chr2: 178105-180104 Arabidopsis thaliana
AT2G01420 5.0kb upstream 5.0kb upstream 8224 true Chr2: 180105-188328 Arabidopsis thaliana
AT2G01420 5.0kb upstream 5.0kb upstream 5000 false Chr2: 183329-188328 Arabidopsis thaliana
AT2G01420 5.0kb downstream 5.0kb downstream 8224 true Chr2: 175105-183328 Arabidopsis thaliana
AT2G01420 5.0kb downstream 5.0kb downstream 5000 false Chr2: 175105-180104 Arabidopsis thaliana
AT2G01420 10.0kb upstream 10.0kb upstream 13224 true Chr2: 180105-193328 Arabidopsis thaliana
AT2G01420 10.0kb upstream 10.0kb upstream 10000 false Chr2: 183329-193328 Arabidopsis thaliana
AT2G01420 10.0kb downstream 10.0kb downstream 13224 true Chr2: 170105-183328 Arabidopsis thaliana
AT2G01420 10.0kb downstream 10.0kb downstream 10000 false Chr2: 170105-180104 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364319 5261 Brassicaceae View MSA
123798727 5264 Brassicales-Malvales View MSA
124349700 5266 SBM View MSA
124250518 5268 Malvidae View MSA
124067962 5270 Rosid View MSA
123747841 5271 Pentapetalae View MSA
122796951 5272 Eudicot View MSA
122046141 5273 Angiosperm View MSA
121351759 5274 Embryophyte View MSA
123382310 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.025       High
cufflinks 5.641       Low
cufflinks 16.056        
cufflinks 6.553        
cufflinks 12.714        
cufflinks 6.488        

0 Strain