Gene : APG9 A. thaliana TAIR10
Primary Identifier:  ? AT2G31260 Defline:  (1 of 1) K17907 - autophagy-related protein 9 (ATG9)
Genomic Order:  2430 Name:  ? AT2G31260
Secondary Identifier:  ? PAC:19641538
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G31260 0.5kb upstream 0.5kb upstream 5880 true Chr2: 13322021-13327900 Arabidopsis thaliana
AT2G31260 0.5kb upstream 0.5kb upstream 500 false Chr2: 13327401-13327900 Arabidopsis thaliana
AT2G31260 0.5kb downstream 0.5kb downstream 5880 true Chr2: 13321521-13327400 Arabidopsis thaliana
AT2G31260 0.5kb downstream 0.5kb downstream 500 false Chr2: 13321521-13322020 Arabidopsis thaliana
AT2G31260 1.0kb upstream 1.0kb upstream 6380 true Chr2: 13322021-13328400 Arabidopsis thaliana
AT2G31260 1.0kb upstream 1.0kb upstream 1000 false Chr2: 13327401-13328400 Arabidopsis thaliana
AT2G31260 1.0kb downstream 1.0kb downstream 6380 true Chr2: 13321021-13327400 Arabidopsis thaliana
AT2G31260 1.0kb downstream 1.0kb downstream 1000 false Chr2: 13321021-13322020 Arabidopsis thaliana
AT2G31260 2.0kb upstream 2.0kb upstream 7380 true Chr2: 13322021-13329400 Arabidopsis thaliana
AT2G31260 2.0kb upstream 2.0kb upstream 2000 false Chr2: 13327401-13329400 Arabidopsis thaliana
AT2G31260 2.0kb downstream 2.0kb downstream 7380 true Chr2: 13320021-13327400 Arabidopsis thaliana
AT2G31260 2.0kb downstream 2.0kb downstream 2000 false Chr2: 13320021-13322020 Arabidopsis thaliana
AT2G31260 5.0kb upstream 5.0kb upstream 10380 true Chr2: 13322021-13332400 Arabidopsis thaliana
AT2G31260 5.0kb upstream 5.0kb upstream 5000 false Chr2: 13327401-13332400 Arabidopsis thaliana
AT2G31260 5.0kb downstream 5.0kb downstream 10380 true Chr2: 13317021-13327400 Arabidopsis thaliana
AT2G31260 5.0kb downstream 5.0kb downstream 5000 false Chr2: 13317021-13322020 Arabidopsis thaliana
AT2G31260 10.0kb upstream 10.0kb upstream 15380 true Chr2: 13322021-13337400 Arabidopsis thaliana
AT2G31260 10.0kb upstream 10.0kb upstream 10000 false Chr2: 13327401-13337400 Arabidopsis thaliana
AT2G31260 10.0kb downstream 10.0kb downstream 15380 true Chr2: 13312021-13327400 Arabidopsis thaliana
AT2G31260 10.0kb downstream 10.0kb downstream 10000 false Chr2: 13312021-13322020 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367461 5261 Brassicaceae View MSA
123835788 5264 Brassicales-Malvales View MSA
124342391 5266 SBM View MSA
124246330 5268 Malvidae View MSA
124064260 5270 Rosid View MSA
123743706 5271 Pentapetalae View MSA
122786972 5272 Eudicot View MSA
122044754 5273 Angiosperm View MSA
121345191 5274 Embryophyte View MSA
123424941 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.948       High
cufflinks 6.191       Low
cufflinks 6.381        
cufflinks 7.654        
cufflinks 7.565        
cufflinks 6.325        

0 Strain