Gene : ACS10 A. thaliana TAIR10
Primary Identifier:  ? AT1G62960 Defline:  (1 of 2) K14270 - aminotransferase (ACS10_12)
Genomic Order:  5205 Name:  ? AT1G62960
Secondary Identifier:  ? PAC:19657970
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana ASPARTATE-DEG1-PWY Arabidopsis thaliana pathologic  
Athaliana ASPARTATESYN-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-3001 Arabidopsis thaliana pathologic  
Athaliana PWY-7115 Arabidopsis thaliana pathologic  
Athaliana PWY-7117 Arabidopsis thaliana pathologic  
Athaliana THRESYN-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G62960 0.5kb upstream 0.5kb upstream 2630 true Chr1: 23318187-23320816 Arabidopsis thaliana
AT1G62960 0.5kb upstream 0.5kb upstream 500 false Chr1: 23320317-23320816 Arabidopsis thaliana
AT1G62960 0.5kb downstream 0.5kb downstream 2630 true Chr1: 23317687-23320316 Arabidopsis thaliana
AT1G62960 0.5kb downstream 0.5kb downstream 500 false Chr1: 23317687-23318186 Arabidopsis thaliana
AT1G62960 1.0kb upstream 1.0kb upstream 3130 true Chr1: 23318187-23321316 Arabidopsis thaliana
AT1G62960 1.0kb upstream 1.0kb upstream 1000 false Chr1: 23320317-23321316 Arabidopsis thaliana
AT1G62960 1.0kb downstream 1.0kb downstream 3130 true Chr1: 23317187-23320316 Arabidopsis thaliana
AT1G62960 1.0kb downstream 1.0kb downstream 1000 false Chr1: 23317187-23318186 Arabidopsis thaliana
AT1G62960 2.0kb upstream 2.0kb upstream 4130 true Chr1: 23318187-23322316 Arabidopsis thaliana
AT1G62960 2.0kb upstream 2.0kb upstream 2000 false Chr1: 23320317-23322316 Arabidopsis thaliana
AT1G62960 2.0kb downstream 2.0kb downstream 4130 true Chr1: 23316187-23320316 Arabidopsis thaliana
AT1G62960 2.0kb downstream 2.0kb downstream 2000 false Chr1: 23316187-23318186 Arabidopsis thaliana
AT1G62960 5.0kb upstream 5.0kb upstream 7130 true Chr1: 23318187-23325316 Arabidopsis thaliana
AT1G62960 5.0kb upstream 5.0kb upstream 5000 false Chr1: 23320317-23325316 Arabidopsis thaliana
AT1G62960 5.0kb downstream 5.0kb downstream 7130 true Chr1: 23313187-23320316 Arabidopsis thaliana
AT1G62960 5.0kb downstream 5.0kb downstream 5000 false Chr1: 23313187-23318186 Arabidopsis thaliana
AT1G62960 10.0kb upstream 10.0kb upstream 12130 true Chr1: 23318187-23330316 Arabidopsis thaliana
AT1G62960 10.0kb upstream 10.0kb upstream 10000 false Chr1: 23320317-23330316 Arabidopsis thaliana
AT1G62960 10.0kb downstream 10.0kb downstream 12130 true Chr1: 23308187-23320316 Arabidopsis thaliana
AT1G62960 10.0kb downstream 10.0kb downstream 10000 false Chr1: 23308187-23318186 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368439 5261 Brassicaceae View MSA
123837243 5264 Brassicales-Malvales View MSA
124346095 5266 SBM View MSA
124240842 5268 Malvidae View MSA
124060973 5270 Rosid View MSA
123749397 5271 Pentapetalae View MSA
122792167 5272 Eudicot View MSA
122042730 5273 Angiosperm View MSA
121351183 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.759        
cufflinks 9.557        
cufflinks 10.211        
cufflinks 10.025        
cufflinks 12.054       High
cufflinks 8.485       Low

0 Strain