Gene : PKL A. thaliana TAIR10
Primary Identifier:  ? AT2G25170 Defline:  (1 of 1) K11643 - chromodomain-helicase-DNA-binding protein 4 (CHD4, MI2B)
Genomic Order:  1785 Name:  ? AT2G25170
Secondary Identifier:  ? PAC:19641305
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0 Pathways

Genomics

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Expression

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5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G25170 0.5kb upstream 0.5kb upstream 10680 true Chr2: 10713307-10723986 Arabidopsis thaliana
AT2G25170 0.5kb upstream 0.5kb upstream 500 false Chr2: 10713307-10713806 Arabidopsis thaliana
AT2G25170 0.5kb downstream 0.5kb downstream 10680 true Chr2: 10713807-10724486 Arabidopsis thaliana
AT2G25170 0.5kb downstream 0.5kb downstream 500 false Chr2: 10723987-10724486 Arabidopsis thaliana
AT2G25170 1.0kb upstream 1.0kb upstream 11180 true Chr2: 10712807-10723986 Arabidopsis thaliana
AT2G25170 1.0kb upstream 1.0kb upstream 1000 false Chr2: 10712807-10713806 Arabidopsis thaliana
AT2G25170 1.0kb downstream 1.0kb downstream 11180 true Chr2: 10713807-10724986 Arabidopsis thaliana
AT2G25170 1.0kb downstream 1.0kb downstream 1000 false Chr2: 10723987-10724986 Arabidopsis thaliana
AT2G25170 2.0kb upstream 2.0kb upstream 12180 true Chr2: 10711807-10723986 Arabidopsis thaliana
AT2G25170 2.0kb upstream 2.0kb upstream 2000 false Chr2: 10711807-10713806 Arabidopsis thaliana
AT2G25170 2.0kb downstream 2.0kb downstream 12180 true Chr2: 10713807-10725986 Arabidopsis thaliana
AT2G25170 2.0kb downstream 2.0kb downstream 2000 false Chr2: 10723987-10725986 Arabidopsis thaliana
AT2G25170 5.0kb upstream 5.0kb upstream 15180 true Chr2: 10708807-10723986 Arabidopsis thaliana
AT2G25170 5.0kb upstream 5.0kb upstream 5000 false Chr2: 10708807-10713806 Arabidopsis thaliana
AT2G25170 5.0kb downstream 5.0kb downstream 15180 true Chr2: 10713807-10728986 Arabidopsis thaliana
AT2G25170 5.0kb downstream 5.0kb downstream 5000 false Chr2: 10723987-10728986 Arabidopsis thaliana
AT2G25170 10.0kb upstream 10.0kb upstream 20180 true Chr2: 10703807-10723986 Arabidopsis thaliana
AT2G25170 10.0kb upstream 10.0kb upstream 10000 false Chr2: 10703807-10713806 Arabidopsis thaliana
AT2G25170 10.0kb downstream 10.0kb downstream 20180 true Chr2: 10713807-10733986 Arabidopsis thaliana
AT2G25170 10.0kb downstream 10.0kb downstream 10000 false Chr2: 10723987-10733986 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362689 5261 Brassicaceae View MSA
123829527 5264 Brassicales-Malvales View MSA
124341698 5266 SBM View MSA
124249334 5268 Malvidae View MSA
124067543 5270 Rosid View MSA
123739750 5271 Pentapetalae View MSA
122789120 5272 Eudicot View MSA
122051163 5273 Angiosperm View MSA
121347605 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.899        
cufflinks 13.28        
cufflinks 9.074       Low
cufflinks 13.912        
cufflinks 9.042       Low
cufflinks 14.375       High

0 Strain