Gene : UBP19 A. thaliana TAIR10
Primary Identifier:  ? AT2G24640 Defline:  (1 of 9) K11855 - ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12] (USP36_42)
Genomic Order:  1733 Name:  ? AT2G24640
Secondary Identifier:  ? PAC:19641024
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0 Pathways

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G24640 0.5kb upstream 0.5kb upstream 4745 true Chr2: 10475210-10479954 Arabidopsis thaliana
AT2G24640 0.5kb upstream 0.5kb upstream 500 false Chr2: 10479455-10479954 Arabidopsis thaliana
AT2G24640 0.5kb downstream 0.5kb downstream 4745 true Chr2: 10474710-10479454 Arabidopsis thaliana
AT2G24640 0.5kb downstream 0.5kb downstream 500 false Chr2: 10474710-10475209 Arabidopsis thaliana
AT2G24640 1.0kb upstream 1.0kb upstream 5245 true Chr2: 10475210-10480454 Arabidopsis thaliana
AT2G24640 1.0kb upstream 1.0kb upstream 1000 false Chr2: 10479455-10480454 Arabidopsis thaliana
AT2G24640 1.0kb downstream 1.0kb downstream 5245 true Chr2: 10474210-10479454 Arabidopsis thaliana
AT2G24640 1.0kb downstream 1.0kb downstream 1000 false Chr2: 10474210-10475209 Arabidopsis thaliana
AT2G24640 2.0kb upstream 2.0kb upstream 6245 true Chr2: 10475210-10481454 Arabidopsis thaliana
AT2G24640 2.0kb upstream 2.0kb upstream 2000 false Chr2: 10479455-10481454 Arabidopsis thaliana
AT2G24640 2.0kb downstream 2.0kb downstream 6245 true Chr2: 10473210-10479454 Arabidopsis thaliana
AT2G24640 2.0kb downstream 2.0kb downstream 2000 false Chr2: 10473210-10475209 Arabidopsis thaliana
AT2G24640 5.0kb upstream 5.0kb upstream 9245 true Chr2: 10475210-10484454 Arabidopsis thaliana
AT2G24640 5.0kb upstream 5.0kb upstream 5000 false Chr2: 10479455-10484454 Arabidopsis thaliana
AT2G24640 5.0kb downstream 5.0kb downstream 9245 true Chr2: 10470210-10479454 Arabidopsis thaliana
AT2G24640 5.0kb downstream 5.0kb downstream 5000 false Chr2: 10470210-10475209 Arabidopsis thaliana
AT2G24640 10.0kb upstream 10.0kb upstream 14245 true Chr2: 10475210-10489454 Arabidopsis thaliana
AT2G24640 10.0kb upstream 10.0kb upstream 10000 false Chr2: 10479455-10489454 Arabidopsis thaliana
AT2G24640 10.0kb downstream 10.0kb downstream 14245 true Chr2: 10465210-10479454 Arabidopsis thaliana
AT2G24640 10.0kb downstream 10.0kb downstream 10000 false Chr2: 10465210-10475209 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374142 5261 Brassicaceae View MSA
123834337 5264 Brassicales-Malvales View MSA
124350322 5266 SBM View MSA
124238605 5268 Malvidae View MSA
124069619 5270 Rosid View MSA
123738264 5271 Pentapetalae View MSA
122797340 5272 Eudicot View MSA
122048060 5273 Angiosperm View MSA
121350818 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.84        
cufflinks 3.107        
cufflinks 1.394       Low
cufflinks 3.342        
cufflinks 1.624        
cufflinks 3.357        

0 Strain