Gene : AT2G24600 A. thaliana TAIR10
Defline:  (1 of 7) PTHR24177:SF18 - ANKYRIN REPEAT FAMILY PROTEIN-RELATED Genomic Order:  1726
Name:  ? AT2G24600 Secondary Identifier:  ? PAC:19641204
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G24600 0.5kb upstream 0.5kb upstream 2909 true Chr2: 10452116-10455024 Arabidopsis thaliana
AT2G24600 0.5kb upstream 0.5kb upstream 500 false Chr2: 10454525-10455024 Arabidopsis thaliana
AT2G24600 0.5kb downstream 0.5kb downstream 2909 true Chr2: 10451616-10454524 Arabidopsis thaliana
AT2G24600 0.5kb downstream 0.5kb downstream 500 false Chr2: 10451616-10452115 Arabidopsis thaliana
AT2G24600 1.0kb upstream 1.0kb upstream 3409 true Chr2: 10452116-10455524 Arabidopsis thaliana
AT2G24600 1.0kb upstream 1.0kb upstream 1000 false Chr2: 10454525-10455524 Arabidopsis thaliana
AT2G24600 1.0kb downstream 1.0kb downstream 3409 true Chr2: 10451116-10454524 Arabidopsis thaliana
AT2G24600 1.0kb downstream 1.0kb downstream 1000 false Chr2: 10451116-10452115 Arabidopsis thaliana
AT2G24600 2.0kb upstream 2.0kb upstream 4409 true Chr2: 10452116-10456524 Arabidopsis thaliana
AT2G24600 2.0kb upstream 2.0kb upstream 2000 false Chr2: 10454525-10456524 Arabidopsis thaliana
AT2G24600 2.0kb downstream 2.0kb downstream 4409 true Chr2: 10450116-10454524 Arabidopsis thaliana
AT2G24600 2.0kb downstream 2.0kb downstream 2000 false Chr2: 10450116-10452115 Arabidopsis thaliana
AT2G24600 5.0kb upstream 5.0kb upstream 7409 true Chr2: 10452116-10459524 Arabidopsis thaliana
AT2G24600 5.0kb upstream 5.0kb upstream 5000 false Chr2: 10454525-10459524 Arabidopsis thaliana
AT2G24600 5.0kb downstream 5.0kb downstream 7409 true Chr2: 10447116-10454524 Arabidopsis thaliana
AT2G24600 5.0kb downstream 5.0kb downstream 5000 false Chr2: 10447116-10452115 Arabidopsis thaliana
AT2G24600 10.0kb upstream 10.0kb upstream 12409 true Chr2: 10452116-10464524 Arabidopsis thaliana
AT2G24600 10.0kb upstream 10.0kb upstream 10000 false Chr2: 10454525-10464524 Arabidopsis thaliana
AT2G24600 10.0kb downstream 10.0kb downstream 12409 true Chr2: 10442116-10454524 Arabidopsis thaliana
AT2G24600 10.0kb downstream 10.0kb downstream 10000 false Chr2: 10442116-10452115 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122338772 5261 Brassicaceae View MSA
123779318 5264 Brassicales-Malvales View MSA
124277646 5266 SBM View MSA
124252688 5268 Malvidae View MSA
124074725 5270 Rosid View MSA
123753624 5271 Pentapetalae View MSA
122797775 5272 Eudicot View MSA
122051097 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351705 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.312       High
cufflinks 10.527        
cufflinks 7.433        
cufflinks 6.42        
cufflinks 5.235       Low
cufflinks 10.5        

0 Strain