Gene : AT2G30620 A. thaliana TAIR10
Defline:  (1 of 1) KOG4012 - Histone H1 Genomic Order:  2355
Name:  ? AT2G30620 Secondary Identifier:  ? PAC:19640546
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G30620 0.5kb upstream 0.5kb upstream 2233 true Chr2: 13044431-13046663 Arabidopsis thaliana
AT2G30620 0.5kb upstream 0.5kb upstream 500 false Chr2: 13044431-13044930 Arabidopsis thaliana
AT2G30620 0.5kb downstream 0.5kb downstream 2233 true Chr2: 13044931-13047163 Arabidopsis thaliana
AT2G30620 0.5kb downstream 0.5kb downstream 500 false Chr2: 13046664-13047163 Arabidopsis thaliana
AT2G30620 1.0kb upstream 1.0kb upstream 2733 true Chr2: 13043931-13046663 Arabidopsis thaliana
AT2G30620 1.0kb upstream 1.0kb upstream 1000 false Chr2: 13043931-13044930 Arabidopsis thaliana
AT2G30620 1.0kb downstream 1.0kb downstream 2733 true Chr2: 13044931-13047663 Arabidopsis thaliana
AT2G30620 1.0kb downstream 1.0kb downstream 1000 false Chr2: 13046664-13047663 Arabidopsis thaliana
AT2G30620 2.0kb upstream 2.0kb upstream 3733 true Chr2: 13042931-13046663 Arabidopsis thaliana
AT2G30620 2.0kb upstream 2.0kb upstream 2000 false Chr2: 13042931-13044930 Arabidopsis thaliana
AT2G30620 2.0kb downstream 2.0kb downstream 3733 true Chr2: 13044931-13048663 Arabidopsis thaliana
AT2G30620 2.0kb downstream 2.0kb downstream 2000 false Chr2: 13046664-13048663 Arabidopsis thaliana
AT2G30620 5.0kb upstream 5.0kb upstream 6733 true Chr2: 13039931-13046663 Arabidopsis thaliana
AT2G30620 5.0kb upstream 5.0kb upstream 5000 false Chr2: 13039931-13044930 Arabidopsis thaliana
AT2G30620 5.0kb downstream 5.0kb downstream 6733 true Chr2: 13044931-13051663 Arabidopsis thaliana
AT2G30620 5.0kb downstream 5.0kb downstream 5000 false Chr2: 13046664-13051663 Arabidopsis thaliana
AT2G30620 10.0kb upstream 10.0kb upstream 11733 true Chr2: 13034931-13046663 Arabidopsis thaliana
AT2G30620 10.0kb upstream 10.0kb upstream 10000 false Chr2: 13034931-13044930 Arabidopsis thaliana
AT2G30620 10.0kb downstream 10.0kb downstream 11733 true Chr2: 13044931-13056663 Arabidopsis thaliana
AT2G30620 10.0kb downstream 10.0kb downstream 10000 false Chr2: 13046664-13056663 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361521 5261 Brassicaceae View MSA
123837224 5264 Brassicales-Malvales View MSA
124350308 5266 SBM View MSA
124250216 5268 Malvidae View MSA
124071858 5270 Rosid View MSA
123748921 5271 Pentapetalae View MSA
122797183 5272 Eudicot View MSA
122049683 5273 Angiosperm View MSA
121350617 5274 Embryophyte View MSA
123428771 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.726     High  
cufflinks 32.167     High  
cufflinks 27.43     High  
cufflinks 31.292     High  
cufflinks 25.16       Low
cufflinks 34.264     High  

0 Strain