Gene : AT2G30170 A. thaliana TAIR10
Defline:  (1 of 1) PTHR12320//PTHR12320:SF7 - PROTEIN PHOSPHATASE 2C // PROTEIN PHOSPHATASE 2C 26-RELATED Genomic Order:  2309
Name:  ? AT2G30170 Secondary Identifier:  ? PAC:19639099
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G30170 0.5kb upstream 0.5kb upstream 2329 true Chr2: 12879675-12882003 Arabidopsis thaliana
AT2G30170 0.5kb upstream 0.5kb upstream 500 false Chr2: 12881504-12882003 Arabidopsis thaliana
AT2G30170 0.5kb downstream 0.5kb downstream 2329 true Chr2: 12879175-12881503 Arabidopsis thaliana
AT2G30170 0.5kb downstream 0.5kb downstream 500 false Chr2: 12879175-12879674 Arabidopsis thaliana
AT2G30170 1.0kb upstream 1.0kb upstream 2829 true Chr2: 12879675-12882503 Arabidopsis thaliana
AT2G30170 1.0kb upstream 1.0kb upstream 1000 false Chr2: 12881504-12882503 Arabidopsis thaliana
AT2G30170 1.0kb downstream 1.0kb downstream 2829 true Chr2: 12878675-12881503 Arabidopsis thaliana
AT2G30170 1.0kb downstream 1.0kb downstream 1000 false Chr2: 12878675-12879674 Arabidopsis thaliana
AT2G30170 2.0kb upstream 2.0kb upstream 3829 true Chr2: 12879675-12883503 Arabidopsis thaliana
AT2G30170 2.0kb upstream 2.0kb upstream 2000 false Chr2: 12881504-12883503 Arabidopsis thaliana
AT2G30170 2.0kb downstream 2.0kb downstream 3829 true Chr2: 12877675-12881503 Arabidopsis thaliana
AT2G30170 2.0kb downstream 2.0kb downstream 2000 false Chr2: 12877675-12879674 Arabidopsis thaliana
AT2G30170 5.0kb upstream 5.0kb upstream 6829 true Chr2: 12879675-12886503 Arabidopsis thaliana
AT2G30170 5.0kb upstream 5.0kb upstream 5000 false Chr2: 12881504-12886503 Arabidopsis thaliana
AT2G30170 5.0kb downstream 5.0kb downstream 6829 true Chr2: 12874675-12881503 Arabidopsis thaliana
AT2G30170 5.0kb downstream 5.0kb downstream 5000 false Chr2: 12874675-12879674 Arabidopsis thaliana
AT2G30170 10.0kb upstream 10.0kb upstream 11829 true Chr2: 12879675-12891503 Arabidopsis thaliana
AT2G30170 10.0kb upstream 10.0kb upstream 10000 false Chr2: 12881504-12891503 Arabidopsis thaliana
AT2G30170 10.0kb downstream 10.0kb downstream 11829 true Chr2: 12869675-12881503 Arabidopsis thaliana
AT2G30170 10.0kb downstream 10.0kb downstream 10000 false Chr2: 12869675-12879674 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361339 5261 Brassicaceae View MSA
123829273 5264 Brassicales-Malvales View MSA
124346579 5266 SBM View MSA
124237499 5268 Malvidae View MSA
124067424 5270 Rosid View MSA
123737907 5271 Pentapetalae View MSA
122786654 5272 Eudicot View MSA
122044601 5273 Angiosperm View MSA
121346475 5274 Embryophyte View MSA
123428574 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.946        
cufflinks 1.622        
cufflinks 13.185       High
cufflinks 1.377        
cufflinks 12.203        
cufflinks 1.381        

0 Strain