Gene : XBAT31 A. thaliana TAIR10
Primary Identifier:  ? AT2G28840 Defline:  (1 of 1) PTHR24128//PTHR24128:SF14 - FAMILY NOT NAMED // E3 UBIQUITIN-PROTEIN LIGASE XBAT31-RELATED
Genomic Order:  2174 Name:  ? AT2G28840
Secondary Identifier:  ? PAC:19641385
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G28840 0.5kb upstream 0.5kb upstream 2906 true Chr2: 12377837-12380742 Arabidopsis thaliana
AT2G28840 0.5kb upstream 0.5kb upstream 500 false Chr2: 12377837-12378336 Arabidopsis thaliana
AT2G28840 0.5kb downstream 0.5kb downstream 2906 true Chr2: 12378337-12381242 Arabidopsis thaliana
AT2G28840 0.5kb downstream 0.5kb downstream 500 false Chr2: 12380743-12381242 Arabidopsis thaliana
AT2G28840 1.0kb upstream 1.0kb upstream 3406 true Chr2: 12377337-12380742 Arabidopsis thaliana
AT2G28840 1.0kb upstream 1.0kb upstream 1000 false Chr2: 12377337-12378336 Arabidopsis thaliana
AT2G28840 1.0kb downstream 1.0kb downstream 3406 true Chr2: 12378337-12381742 Arabidopsis thaliana
AT2G28840 1.0kb downstream 1.0kb downstream 1000 false Chr2: 12380743-12381742 Arabidopsis thaliana
AT2G28840 2.0kb upstream 2.0kb upstream 4406 true Chr2: 12376337-12380742 Arabidopsis thaliana
AT2G28840 2.0kb upstream 2.0kb upstream 2000 false Chr2: 12376337-12378336 Arabidopsis thaliana
AT2G28840 2.0kb downstream 2.0kb downstream 4406 true Chr2: 12378337-12382742 Arabidopsis thaliana
AT2G28840 2.0kb downstream 2.0kb downstream 2000 false Chr2: 12380743-12382742 Arabidopsis thaliana
AT2G28840 5.0kb upstream 5.0kb upstream 7406 true Chr2: 12373337-12380742 Arabidopsis thaliana
AT2G28840 5.0kb upstream 5.0kb upstream 5000 false Chr2: 12373337-12378336 Arabidopsis thaliana
AT2G28840 5.0kb downstream 5.0kb downstream 7406 true Chr2: 12378337-12385742 Arabidopsis thaliana
AT2G28840 5.0kb downstream 5.0kb downstream 5000 false Chr2: 12380743-12385742 Arabidopsis thaliana
AT2G28840 10.0kb upstream 10.0kb upstream 12406 true Chr2: 12368337-12380742 Arabidopsis thaliana
AT2G28840 10.0kb upstream 10.0kb upstream 10000 false Chr2: 12368337-12378336 Arabidopsis thaliana
AT2G28840 10.0kb downstream 10.0kb downstream 12406 true Chr2: 12378337-12390742 Arabidopsis thaliana
AT2G28840 10.0kb downstream 10.0kb downstream 10000 false Chr2: 12380743-12390742 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371594 5261 Brassicaceae View MSA
123828966 5264 Brassicales-Malvales View MSA
124336399 5266 SBM View MSA
124253470 5268 Malvidae View MSA
124067649 5270 Rosid View MSA
123746800 5271 Pentapetalae View MSA
122791790 5272 Eudicot View MSA
122045782 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121344984 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 46.592     High Low
cufflinks 70.757     High High
cufflinks 51.402     High  
cufflinks 70.206     High High
cufflinks 63.884     High  
cufflinks 45.943     High Low

0 Strain