Gene : ftsh3 A. thaliana TAIR10
Primary Identifier:  ? AT2G29080 Defline:  (1 of 2) K08956 - AFG3 family protein [EC:3.4.24.-] (AFG3)
Genomic Order:  2197 Name:  ? AT2G29080
Secondary Identifier:  ? PAC:19638381
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G29080 0.5kb upstream 0.5kb upstream 4159 true Chr2: 12489627-12493785 Arabidopsis thaliana
AT2G29080 0.5kb upstream 0.5kb upstream 500 false Chr2: 12493286-12493785 Arabidopsis thaliana
AT2G29080 0.5kb downstream 0.5kb downstream 4159 true Chr2: 12489127-12493285 Arabidopsis thaliana
AT2G29080 0.5kb downstream 0.5kb downstream 500 false Chr2: 12489127-12489626 Arabidopsis thaliana
AT2G29080 1.0kb upstream 1.0kb upstream 4659 true Chr2: 12489627-12494285 Arabidopsis thaliana
AT2G29080 1.0kb upstream 1.0kb upstream 1000 false Chr2: 12493286-12494285 Arabidopsis thaliana
AT2G29080 1.0kb downstream 1.0kb downstream 4659 true Chr2: 12488627-12493285 Arabidopsis thaliana
AT2G29080 1.0kb downstream 1.0kb downstream 1000 false Chr2: 12488627-12489626 Arabidopsis thaliana
AT2G29080 2.0kb upstream 2.0kb upstream 5659 true Chr2: 12489627-12495285 Arabidopsis thaliana
AT2G29080 2.0kb upstream 2.0kb upstream 2000 false Chr2: 12493286-12495285 Arabidopsis thaliana
AT2G29080 2.0kb downstream 2.0kb downstream 5659 true Chr2: 12487627-12493285 Arabidopsis thaliana
AT2G29080 2.0kb downstream 2.0kb downstream 2000 false Chr2: 12487627-12489626 Arabidopsis thaliana
AT2G29080 5.0kb upstream 5.0kb upstream 8659 true Chr2: 12489627-12498285 Arabidopsis thaliana
AT2G29080 5.0kb upstream 5.0kb upstream 5000 false Chr2: 12493286-12498285 Arabidopsis thaliana
AT2G29080 5.0kb downstream 5.0kb downstream 8659 true Chr2: 12484627-12493285 Arabidopsis thaliana
AT2G29080 5.0kb downstream 5.0kb downstream 5000 false Chr2: 12484627-12489626 Arabidopsis thaliana
AT2G29080 10.0kb upstream 10.0kb upstream 13659 true Chr2: 12489627-12503285 Arabidopsis thaliana
AT2G29080 10.0kb upstream 10.0kb upstream 10000 false Chr2: 12493286-12503285 Arabidopsis thaliana
AT2G29080 10.0kb downstream 10.0kb downstream 13659 true Chr2: 12479627-12493285 Arabidopsis thaliana
AT2G29080 10.0kb downstream 10.0kb downstream 10000 false Chr2: 12479627-12489626 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373675 5261 Brassicaceae View MSA
123837441 5264 Brassicales-Malvales View MSA
124336403 5266 SBM View MSA
124245446 5268 Malvidae View MSA
124064309 5270 Rosid View MSA
123736600 5271 Pentapetalae View MSA
122793293 5272 Eudicot View MSA
122047667 5273 Angiosperm View MSA
121345143 5274 Embryophyte View MSA
123426820 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.076     High High
cufflinks 25.481       Low
cufflinks 26.905     High  
cufflinks 27.016        
cufflinks 29.6     High  
cufflinks 30.398     High  

0 Strain