Gene : IPT2 A. thaliana TAIR10
Primary Identifier:  ? AT2G27760 Defline:  (1 of 1) 2.5.1.75//2.5.1.8 - tRNA dimethylallyltransferase / tRNA prenyltransferase // Transferred entry: 2.5.1.75
Genomic Order:  2062 Name:  ? AT2G27760
Secondary Identifier:  ? PAC:19640661
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-2781 Arabidopsis thaliana pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G27760 0.5kb upstream 0.5kb upstream 3294 true Chr2: 11824298-11827591 Arabidopsis thaliana
AT2G27760 0.5kb upstream 0.5kb upstream 500 false Chr2: 11824298-11824797 Arabidopsis thaliana
AT2G27760 0.5kb downstream 0.5kb downstream 3294 true Chr2: 11824798-11828091 Arabidopsis thaliana
AT2G27760 0.5kb downstream 0.5kb downstream 500 false Chr2: 11827592-11828091 Arabidopsis thaliana
AT2G27760 1.0kb upstream 1.0kb upstream 3794 true Chr2: 11823798-11827591 Arabidopsis thaliana
AT2G27760 1.0kb upstream 1.0kb upstream 1000 false Chr2: 11823798-11824797 Arabidopsis thaliana
AT2G27760 1.0kb downstream 1.0kb downstream 3794 true Chr2: 11824798-11828591 Arabidopsis thaliana
AT2G27760 1.0kb downstream 1.0kb downstream 1000 false Chr2: 11827592-11828591 Arabidopsis thaliana
AT2G27760 2.0kb upstream 2.0kb upstream 4794 true Chr2: 11822798-11827591 Arabidopsis thaliana
AT2G27760 2.0kb upstream 2.0kb upstream 2000 false Chr2: 11822798-11824797 Arabidopsis thaliana
AT2G27760 2.0kb downstream 2.0kb downstream 4794 true Chr2: 11824798-11829591 Arabidopsis thaliana
AT2G27760 2.0kb downstream 2.0kb downstream 2000 false Chr2: 11827592-11829591 Arabidopsis thaliana
AT2G27760 5.0kb upstream 5.0kb upstream 7794 true Chr2: 11819798-11827591 Arabidopsis thaliana
AT2G27760 5.0kb upstream 5.0kb upstream 5000 false Chr2: 11819798-11824797 Arabidopsis thaliana
AT2G27760 5.0kb downstream 5.0kb downstream 7794 true Chr2: 11824798-11832591 Arabidopsis thaliana
AT2G27760 5.0kb downstream 5.0kb downstream 5000 false Chr2: 11827592-11832591 Arabidopsis thaliana
AT2G27760 10.0kb upstream 10.0kb upstream 12794 true Chr2: 11814798-11827591 Arabidopsis thaliana
AT2G27760 10.0kb upstream 10.0kb upstream 10000 false Chr2: 11814798-11824797 Arabidopsis thaliana
AT2G27760 10.0kb downstream 10.0kb downstream 12794 true Chr2: 11824798-11837591 Arabidopsis thaliana
AT2G27760 10.0kb downstream 10.0kb downstream 10000 false Chr2: 11827592-11837591 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368424 5261 Brassicaceae View MSA
123829881 5264 Brassicales-Malvales View MSA
124341186 5266 SBM View MSA
124237020 5268 Malvidae View MSA
124061128 5270 Rosid View MSA
123740850 5271 Pentapetalae View MSA
122786758 5272 Eudicot View MSA
122043118 5273 Angiosperm View MSA
121350682 5274 Embryophyte View MSA
123428607 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.963        
cufflinks 3.921        
cufflinks 2.502       Low
cufflinks 4.229       High
cufflinks 2.781        
cufflinks 3.901        

0 Strain