Gene : FD3 A. thaliana TAIR10
Primary Identifier:  ? AT2G27510 Defline:  (1 of 1) PTHR19370:SF96 - FERREDOXIN-3, CHLOROPLASTIC
Genomic Order:  2039 Name:  ? AT2G27510
Secondary Identifier:  ? PAC:19638679
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G27510 0.5kb upstream 0.5kb upstream 1898 true Chr2: 11758079-11759976 Arabidopsis thaliana
AT2G27510 0.5kb upstream 0.5kb upstream 500 false Chr2: 11759477-11759976 Arabidopsis thaliana
AT2G27510 0.5kb downstream 0.5kb downstream 1898 true Chr2: 11757579-11759476 Arabidopsis thaliana
AT2G27510 0.5kb downstream 0.5kb downstream 500 false Chr2: 11757579-11758078 Arabidopsis thaliana
AT2G27510 1.0kb upstream 1.0kb upstream 2398 true Chr2: 11758079-11760476 Arabidopsis thaliana
AT2G27510 1.0kb upstream 1.0kb upstream 1000 false Chr2: 11759477-11760476 Arabidopsis thaliana
AT2G27510 1.0kb downstream 1.0kb downstream 2398 true Chr2: 11757079-11759476 Arabidopsis thaliana
AT2G27510 1.0kb downstream 1.0kb downstream 1000 false Chr2: 11757079-11758078 Arabidopsis thaliana
AT2G27510 2.0kb upstream 2.0kb upstream 3398 true Chr2: 11758079-11761476 Arabidopsis thaliana
AT2G27510 2.0kb upstream 2.0kb upstream 2000 false Chr2: 11759477-11761476 Arabidopsis thaliana
AT2G27510 2.0kb downstream 2.0kb downstream 3398 true Chr2: 11756079-11759476 Arabidopsis thaliana
AT2G27510 2.0kb downstream 2.0kb downstream 2000 false Chr2: 11756079-11758078 Arabidopsis thaliana
AT2G27510 5.0kb upstream 5.0kb upstream 6398 true Chr2: 11758079-11764476 Arabidopsis thaliana
AT2G27510 5.0kb upstream 5.0kb upstream 5000 false Chr2: 11759477-11764476 Arabidopsis thaliana
AT2G27510 5.0kb downstream 5.0kb downstream 6398 true Chr2: 11753079-11759476 Arabidopsis thaliana
AT2G27510 5.0kb downstream 5.0kb downstream 5000 false Chr2: 11753079-11758078 Arabidopsis thaliana
AT2G27510 10.0kb upstream 10.0kb upstream 11398 true Chr2: 11758079-11769476 Arabidopsis thaliana
AT2G27510 10.0kb upstream 10.0kb upstream 10000 false Chr2: 11759477-11769476 Arabidopsis thaliana
AT2G27510 10.0kb downstream 10.0kb downstream 11398 true Chr2: 11748079-11759476 Arabidopsis thaliana
AT2G27510 10.0kb downstream 10.0kb downstream 10000 false Chr2: 11748079-11758078 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371515 5261 Brassicaceae View MSA
123839899 5264 Brassicales-Malvales View MSA
124350260 5266 SBM View MSA
124247687 5268 Malvidae View MSA
124073672 5270 Rosid View MSA
123748540 5271 Pentapetalae View MSA
122797784 5272 Eudicot View MSA
122047463 5273 Angiosperm View MSA
123429005 5275 Viridiplantae View MSA
121350651 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.027        
cufflinks 55.736     High  
cufflinks 5.703        
cufflinks 73.759     High  
cufflinks 5.685        
cufflinks 80.646     High High

0 Strain