Gene : AT2G27350 A. thaliana TAIR10
Defline:  (1 of 1) K12655 - OTU domain-containing protein 5 (OTUD5, DUBA) Genomic Order:  2021
Name:  ? AT2G27350 Secondary Identifier:  ? PAC:19642761
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G27350 0.5kb upstream 0.5kb upstream 5224 true Chr2: 11699549-11704772 Arabidopsis thaliana
AT2G27350 0.5kb upstream 0.5kb upstream 500 false Chr2: 11704273-11704772 Arabidopsis thaliana
AT2G27350 0.5kb downstream 0.5kb downstream 5224 true Chr2: 11699049-11704272 Arabidopsis thaliana
AT2G27350 0.5kb downstream 0.5kb downstream 500 false Chr2: 11699049-11699548 Arabidopsis thaliana
AT2G27350 1.0kb upstream 1.0kb upstream 5724 true Chr2: 11699549-11705272 Arabidopsis thaliana
AT2G27350 1.0kb upstream 1.0kb upstream 1000 false Chr2: 11704273-11705272 Arabidopsis thaliana
AT2G27350 1.0kb downstream 1.0kb downstream 5724 true Chr2: 11698549-11704272 Arabidopsis thaliana
AT2G27350 1.0kb downstream 1.0kb downstream 1000 false Chr2: 11698549-11699548 Arabidopsis thaliana
AT2G27350 2.0kb upstream 2.0kb upstream 6724 true Chr2: 11699549-11706272 Arabidopsis thaliana
AT2G27350 2.0kb upstream 2.0kb upstream 2000 false Chr2: 11704273-11706272 Arabidopsis thaliana
AT2G27350 2.0kb downstream 2.0kb downstream 6724 true Chr2: 11697549-11704272 Arabidopsis thaliana
AT2G27350 2.0kb downstream 2.0kb downstream 2000 false Chr2: 11697549-11699548 Arabidopsis thaliana
AT2G27350 5.0kb upstream 5.0kb upstream 9724 true Chr2: 11699549-11709272 Arabidopsis thaliana
AT2G27350 5.0kb upstream 5.0kb upstream 5000 false Chr2: 11704273-11709272 Arabidopsis thaliana
AT2G27350 5.0kb downstream 5.0kb downstream 9724 true Chr2: 11694549-11704272 Arabidopsis thaliana
AT2G27350 5.0kb downstream 5.0kb downstream 5000 false Chr2: 11694549-11699548 Arabidopsis thaliana
AT2G27350 10.0kb upstream 10.0kb upstream 14724 true Chr2: 11699549-11714272 Arabidopsis thaliana
AT2G27350 10.0kb upstream 10.0kb upstream 10000 false Chr2: 11704273-11714272 Arabidopsis thaliana
AT2G27350 10.0kb downstream 10.0kb downstream 14724 true Chr2: 11689549-11704272 Arabidopsis thaliana
AT2G27350 10.0kb downstream 10.0kb downstream 10000 false Chr2: 11689549-11699548 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365895 5261 Brassicaceae View MSA
123840970 5264 Brassicales-Malvales View MSA
124322811 5266 SBM View MSA
124245080 5268 Malvidae View MSA
124067322 5270 Rosid View MSA
123741377 5271 Pentapetalae View MSA
122789653 5272 Eudicot View MSA
122045711 5273 Angiosperm View MSA
121348334 5274 Embryophyte View MSA
123428461 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.058        
cufflinks 1.964        
cufflinks 1.66       Low
cufflinks 2.12       High
cufflinks 1.713        
cufflinks 1.793        

0 Strain