Gene : AT2G27090 A. thaliana TAIR10
Defline:  (1 of 15) PF04782//PF04783 - Protein of unknown function (DUF632) (DUF632) // Protein of unknown function (DUF630) (DUF630) Genomic Order:  1990
Name:  ? AT2G27090 Secondary Identifier:  ? PAC:19640125
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G27090 0.5kb upstream 0.5kb upstream 4921 true Chr2: 11567436-11572356 Arabidopsis thaliana
AT2G27090 0.5kb upstream 0.5kb upstream 500 false Chr2: 11571857-11572356 Arabidopsis thaliana
AT2G27090 0.5kb downstream 0.5kb downstream 4921 true Chr2: 11566936-11571856 Arabidopsis thaliana
AT2G27090 0.5kb downstream 0.5kb downstream 500 false Chr2: 11566936-11567435 Arabidopsis thaliana
AT2G27090 1.0kb upstream 1.0kb upstream 5421 true Chr2: 11567436-11572856 Arabidopsis thaliana
AT2G27090 1.0kb upstream 1.0kb upstream 1000 false Chr2: 11571857-11572856 Arabidopsis thaliana
AT2G27090 1.0kb downstream 1.0kb downstream 5421 true Chr2: 11566436-11571856 Arabidopsis thaliana
AT2G27090 1.0kb downstream 1.0kb downstream 1000 false Chr2: 11566436-11567435 Arabidopsis thaliana
AT2G27090 2.0kb upstream 2.0kb upstream 6421 true Chr2: 11567436-11573856 Arabidopsis thaliana
AT2G27090 2.0kb upstream 2.0kb upstream 2000 false Chr2: 11571857-11573856 Arabidopsis thaliana
AT2G27090 2.0kb downstream 2.0kb downstream 6421 true Chr2: 11565436-11571856 Arabidopsis thaliana
AT2G27090 2.0kb downstream 2.0kb downstream 2000 false Chr2: 11565436-11567435 Arabidopsis thaliana
AT2G27090 5.0kb upstream 5.0kb upstream 9421 true Chr2: 11567436-11576856 Arabidopsis thaliana
AT2G27090 5.0kb upstream 5.0kb upstream 5000 false Chr2: 11571857-11576856 Arabidopsis thaliana
AT2G27090 5.0kb downstream 5.0kb downstream 9421 true Chr2: 11562436-11571856 Arabidopsis thaliana
AT2G27090 5.0kb downstream 5.0kb downstream 5000 false Chr2: 11562436-11567435 Arabidopsis thaliana
AT2G27090 10.0kb upstream 10.0kb upstream 14421 true Chr2: 11567436-11581856 Arabidopsis thaliana
AT2G27090 10.0kb upstream 10.0kb upstream 10000 false Chr2: 11571857-11581856 Arabidopsis thaliana
AT2G27090 10.0kb downstream 10.0kb downstream 14421 true Chr2: 11557436-11571856 Arabidopsis thaliana
AT2G27090 10.0kb downstream 10.0kb downstream 10000 false Chr2: 11557436-11567435 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361986 5261 Brassicaceae View MSA
123831909 5264 Brassicales-Malvales View MSA
124336874 5266 SBM View MSA
124243012 5268 Malvidae View MSA
124063083 5270 Rosid View MSA
123737683 5271 Pentapetalae View MSA
122785786 5272 Eudicot View MSA
122051058 5273 Angiosperm View MSA
121350303 5274 Embryophyte View MSA
123381668 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.383        
cufflinks 7.989        
cufflinks 5.942        
cufflinks 9.022       High
cufflinks 5.728       Low
cufflinks 7.171        

0 Strain