Gene : AT2G16860 A. thaliana TAIR10
Defline:  (1 of 1) K12868 - pre-mRNA-splicing factor SYF2 (SYF2) Genomic Order:  909
Name:  ? AT2G16860 Secondary Identifier:  ? PAC:19642265
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G16860 0.5kb upstream 0.5kb upstream 3253 true Chr2: 7303919-7307171 Arabidopsis thaliana
AT2G16860 0.5kb upstream 0.5kb upstream 500 false Chr2: 7306672-7307171 Arabidopsis thaliana
AT2G16860 0.5kb downstream 0.5kb downstream 3253 true Chr2: 7303419-7306671 Arabidopsis thaliana
AT2G16860 0.5kb downstream 0.5kb downstream 500 false Chr2: 7303419-7303918 Arabidopsis thaliana
AT2G16860 1.0kb upstream 1.0kb upstream 3753 true Chr2: 7303919-7307671 Arabidopsis thaliana
AT2G16860 1.0kb upstream 1.0kb upstream 1000 false Chr2: 7306672-7307671 Arabidopsis thaliana
AT2G16860 1.0kb downstream 1.0kb downstream 3753 true Chr2: 7302919-7306671 Arabidopsis thaliana
AT2G16860 1.0kb downstream 1.0kb downstream 1000 false Chr2: 7302919-7303918 Arabidopsis thaliana
AT2G16860 2.0kb upstream 2.0kb upstream 4753 true Chr2: 7303919-7308671 Arabidopsis thaliana
AT2G16860 2.0kb upstream 2.0kb upstream 2000 false Chr2: 7306672-7308671 Arabidopsis thaliana
AT2G16860 2.0kb downstream 2.0kb downstream 4753 true Chr2: 7301919-7306671 Arabidopsis thaliana
AT2G16860 2.0kb downstream 2.0kb downstream 2000 false Chr2: 7301919-7303918 Arabidopsis thaliana
AT2G16860 5.0kb upstream 5.0kb upstream 7753 true Chr2: 7303919-7311671 Arabidopsis thaliana
AT2G16860 5.0kb upstream 5.0kb upstream 5000 false Chr2: 7306672-7311671 Arabidopsis thaliana
AT2G16860 5.0kb downstream 5.0kb downstream 7753 true Chr2: 7298919-7306671 Arabidopsis thaliana
AT2G16860 5.0kb downstream 5.0kb downstream 5000 false Chr2: 7298919-7303918 Arabidopsis thaliana
AT2G16860 10.0kb upstream 10.0kb upstream 12753 true Chr2: 7303919-7316671 Arabidopsis thaliana
AT2G16860 10.0kb upstream 10.0kb upstream 10000 false Chr2: 7306672-7316671 Arabidopsis thaliana
AT2G16860 10.0kb downstream 10.0kb downstream 12753 true Chr2: 7293919-7306671 Arabidopsis thaliana
AT2G16860 10.0kb downstream 10.0kb downstream 10000 false Chr2: 7293919-7303918 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366442 5261 Brassicaceae View MSA
123828655 5264 Brassicales-Malvales View MSA
124345716 5266 SBM View MSA
124253605 5268 Malvidae View MSA
124068841 5270 Rosid View MSA
123740835 5271 Pentapetalae View MSA
122793890 5272 Eudicot View MSA
122049804 5273 Angiosperm View MSA
121347073 5274 Embryophyte View MSA
123424870 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.935        
cufflinks 16.253        
cufflinks 15.037        
cufflinks 16.732        
cufflinks 14.149       Low
cufflinks 17.854       High

0 Strain