Gene : AT2G07170 A. thaliana TAIR10
Defline:  (1 of 1) PTHR31355:SF5 - ARM REPEAT SUPERFAMILY PROTEIN Genomic Order:  487
Name:  ? AT2G07170 Secondary Identifier:  ? PAC:19642613
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G07170 0.5kb upstream 0.5kb upstream 4281 true Chr2: 2974540-2978820 Arabidopsis thaliana
AT2G07170 0.5kb upstream 0.5kb upstream 500 false Chr2: 2974540-2975039 Arabidopsis thaliana
AT2G07170 0.5kb downstream 0.5kb downstream 4281 true Chr2: 2975040-2979320 Arabidopsis thaliana
AT2G07170 0.5kb downstream 0.5kb downstream 500 false Chr2: 2978821-2979320 Arabidopsis thaliana
AT2G07170 1.0kb upstream 1.0kb upstream 4781 true Chr2: 2974040-2978820 Arabidopsis thaliana
AT2G07170 1.0kb upstream 1.0kb upstream 1000 false Chr2: 2974040-2975039 Arabidopsis thaliana
AT2G07170 1.0kb downstream 1.0kb downstream 4781 true Chr2: 2975040-2979820 Arabidopsis thaliana
AT2G07170 1.0kb downstream 1.0kb downstream 1000 false Chr2: 2978821-2979820 Arabidopsis thaliana
AT2G07170 2.0kb upstream 2.0kb upstream 5781 true Chr2: 2973040-2978820 Arabidopsis thaliana
AT2G07170 2.0kb upstream 2.0kb upstream 2000 false Chr2: 2973040-2975039 Arabidopsis thaliana
AT2G07170 2.0kb downstream 2.0kb downstream 5781 true Chr2: 2975040-2980820 Arabidopsis thaliana
AT2G07170 2.0kb downstream 2.0kb downstream 2000 false Chr2: 2978821-2980820 Arabidopsis thaliana
AT2G07170 5.0kb upstream 5.0kb upstream 8781 true Chr2: 2970040-2978820 Arabidopsis thaliana
AT2G07170 5.0kb upstream 5.0kb upstream 5000 false Chr2: 2970040-2975039 Arabidopsis thaliana
AT2G07170 5.0kb downstream 5.0kb downstream 8781 true Chr2: 2975040-2983820 Arabidopsis thaliana
AT2G07170 5.0kb downstream 5.0kb downstream 5000 false Chr2: 2978821-2983820 Arabidopsis thaliana
AT2G07170 10.0kb upstream 10.0kb upstream 13781 true Chr2: 2965040-2978820 Arabidopsis thaliana
AT2G07170 10.0kb upstream 10.0kb upstream 10000 false Chr2: 2965040-2975039 Arabidopsis thaliana
AT2G07170 10.0kb downstream 10.0kb downstream 13781 true Chr2: 2975040-2988820 Arabidopsis thaliana
AT2G07170 10.0kb downstream 10.0kb downstream 10000 false Chr2: 2978821-2988820 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367778 5261 Brassicaceae View MSA
123832024 5264 Brassicales-Malvales View MSA
124339958 5266 SBM View MSA
124240272 5268 Malvidae View MSA
124068750 5270 Rosid View MSA
123737726 5271 Pentapetalae View MSA
122786179 5272 Eudicot View MSA
122044340 5273 Angiosperm View MSA
121344620 5274 Embryophyte View MSA
123426800 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.607        
cufflinks 5.334        
cufflinks 1.04        
cufflinks 5.162        
cufflinks 0.638       Low
cufflinks 7.551       High

0 Strain