Gene : AT2G05530 A. thaliana TAIR10
Defline:  (1 of 6) PF07172 - Glycine rich protein family (GRP) Genomic Order:  417
Name:  ? AT2G05530 Secondary Identifier:  ? PAC:19640860
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G05530 0.5kb upstream 0.5kb upstream 1333 true Chr2: 2029212-2030544 Arabidopsis thaliana
AT2G05530 0.5kb upstream 0.5kb upstream 500 false Chr2: 2029212-2029711 Arabidopsis thaliana
AT2G05530 0.5kb downstream 0.5kb downstream 1333 true Chr2: 2029712-2031044 Arabidopsis thaliana
AT2G05530 0.5kb downstream 0.5kb downstream 500 false Chr2: 2030545-2031044 Arabidopsis thaliana
AT2G05530 1.0kb upstream 1.0kb upstream 1833 true Chr2: 2028712-2030544 Arabidopsis thaliana
AT2G05530 1.0kb upstream 1.0kb upstream 1000 false Chr2: 2028712-2029711 Arabidopsis thaliana
AT2G05530 1.0kb downstream 1.0kb downstream 1833 true Chr2: 2029712-2031544 Arabidopsis thaliana
AT2G05530 1.0kb downstream 1.0kb downstream 1000 false Chr2: 2030545-2031544 Arabidopsis thaliana
AT2G05530 2.0kb upstream 2.0kb upstream 2833 true Chr2: 2027712-2030544 Arabidopsis thaliana
AT2G05530 2.0kb upstream 2.0kb upstream 2000 false Chr2: 2027712-2029711 Arabidopsis thaliana
AT2G05530 2.0kb downstream 2.0kb downstream 2833 true Chr2: 2029712-2032544 Arabidopsis thaliana
AT2G05530 2.0kb downstream 2.0kb downstream 2000 false Chr2: 2030545-2032544 Arabidopsis thaliana
AT2G05530 5.0kb upstream 5.0kb upstream 5833 true Chr2: 2024712-2030544 Arabidopsis thaliana
AT2G05530 5.0kb upstream 5.0kb upstream 5000 false Chr2: 2024712-2029711 Arabidopsis thaliana
AT2G05530 5.0kb downstream 5.0kb downstream 5833 true Chr2: 2029712-2035544 Arabidopsis thaliana
AT2G05530 5.0kb downstream 5.0kb downstream 5000 false Chr2: 2030545-2035544 Arabidopsis thaliana
AT2G05530 10.0kb upstream 10.0kb upstream 10833 true Chr2: 2019712-2030544 Arabidopsis thaliana
AT2G05530 10.0kb upstream 10.0kb upstream 10000 false Chr2: 2019712-2029711 Arabidopsis thaliana
AT2G05530 10.0kb downstream 10.0kb downstream 10833 true Chr2: 2029712-2040544 Arabidopsis thaliana
AT2G05530 10.0kb downstream 10.0kb downstream 10000 false Chr2: 2030545-2040544 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376516 5261 Brassicaceae View MSA
123837571 5264 Brassicales-Malvales View MSA
124346130 5266 SBM View MSA
124249134 5268 Malvidae View MSA
124073083 5270 Rosid View MSA
123750228 5271 Pentapetalae View MSA
122798200 5272 Eudicot View MSA
122051270 5273 Angiosperm View MSA
121312387 5274 Embryophyte View MSA
123349563 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.868        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.252        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.627       Low

0 Strain