Gene : GRP-3 A. thaliana TAIR10
Primary Identifier:  ? AT2G05520 Defline:  (1 of 6) PF07172 - Glycine rich protein family (GRP)
Genomic Order:  416 Name:  ? AT2G05520
Secondary Identifier:  ? PAC:19638114
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G05520 0.5kb upstream 0.5kb upstream 1456 true Chr2: 2025662-2027117 Arabidopsis thaliana
AT2G05520 0.5kb upstream 0.5kb upstream 500 false Chr2: 2025662-2026161 Arabidopsis thaliana
AT2G05520 0.5kb downstream 0.5kb downstream 1456 true Chr2: 2026162-2027617 Arabidopsis thaliana
AT2G05520 0.5kb downstream 0.5kb downstream 500 false Chr2: 2027118-2027617 Arabidopsis thaliana
AT2G05520 1.0kb upstream 1.0kb upstream 1956 true Chr2: 2025162-2027117 Arabidopsis thaliana
AT2G05520 1.0kb upstream 1.0kb upstream 1000 false Chr2: 2025162-2026161 Arabidopsis thaliana
AT2G05520 1.0kb downstream 1.0kb downstream 1956 true Chr2: 2026162-2028117 Arabidopsis thaliana
AT2G05520 1.0kb downstream 1.0kb downstream 1000 false Chr2: 2027118-2028117 Arabidopsis thaliana
AT2G05520 2.0kb upstream 2.0kb upstream 2956 true Chr2: 2024162-2027117 Arabidopsis thaliana
AT2G05520 2.0kb upstream 2.0kb upstream 2000 false Chr2: 2024162-2026161 Arabidopsis thaliana
AT2G05520 2.0kb downstream 2.0kb downstream 2956 true Chr2: 2026162-2029117 Arabidopsis thaliana
AT2G05520 2.0kb downstream 2.0kb downstream 2000 false Chr2: 2027118-2029117 Arabidopsis thaliana
AT2G05520 5.0kb upstream 5.0kb upstream 5956 true Chr2: 2021162-2027117 Arabidopsis thaliana
AT2G05520 5.0kb upstream 5.0kb upstream 5000 false Chr2: 2021162-2026161 Arabidopsis thaliana
AT2G05520 5.0kb downstream 5.0kb downstream 5956 true Chr2: 2026162-2032117 Arabidopsis thaliana
AT2G05520 5.0kb downstream 5.0kb downstream 5000 false Chr2: 2027118-2032117 Arabidopsis thaliana
AT2G05520 10.0kb upstream 10.0kb upstream 10956 true Chr2: 2016162-2027117 Arabidopsis thaliana
AT2G05520 10.0kb upstream 10.0kb upstream 10000 false Chr2: 2016162-2026161 Arabidopsis thaliana
AT2G05520 10.0kb downstream 10.0kb downstream 10956 true Chr2: 2026162-2037117 Arabidopsis thaliana
AT2G05520 10.0kb downstream 10.0kb downstream 10000 false Chr2: 2027118-2037117 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376516 5261 Brassicaceae View MSA
123837571 5264 Brassicales-Malvales View MSA
124346130 5266 SBM View MSA
124249134 5268 Malvidae View MSA
124073083 5270 Rosid View MSA
123750228 5271 Pentapetalae View MSA
122798200 5272 Eudicot View MSA
122051270 5273 Angiosperm View MSA
121312387 5274 Embryophyte View MSA
123349563 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 459.653     High High
cufflinks 0.723        
cufflinks 254.432     High  
cufflinks 1.195        
cufflinks 221.458     High  
cufflinks 0.862        

0 Strain