Gene : AT2G04050 A. thaliana TAIR10
Defline:  (1 of 14) PTHR11206:SF87 - MATE EFFLUX FAMILY PROTEIN-RELATED Genomic Order:  306
Name:  ? AT2G04050 Secondary Identifier:  ? PAC:19640633
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G04050 0.5kb upstream 0.5kb upstream 2385 true Chr2: 1337386-1339770 Arabidopsis thaliana
AT2G04050 0.5kb upstream 0.5kb upstream 500 false Chr2: 1339271-1339770 Arabidopsis thaliana
AT2G04050 0.5kb downstream 0.5kb downstream 2385 true Chr2: 1336886-1339270 Arabidopsis thaliana
AT2G04050 0.5kb downstream 0.5kb downstream 500 false Chr2: 1336886-1337385 Arabidopsis thaliana
AT2G04050 1.0kb upstream 1.0kb upstream 2885 true Chr2: 1337386-1340270 Arabidopsis thaliana
AT2G04050 1.0kb upstream 1.0kb upstream 1000 false Chr2: 1339271-1340270 Arabidopsis thaliana
AT2G04050 1.0kb downstream 1.0kb downstream 2885 true Chr2: 1336386-1339270 Arabidopsis thaliana
AT2G04050 1.0kb downstream 1.0kb downstream 1000 false Chr2: 1336386-1337385 Arabidopsis thaliana
AT2G04050 2.0kb upstream 2.0kb upstream 3885 true Chr2: 1337386-1341270 Arabidopsis thaliana
AT2G04050 2.0kb upstream 2.0kb upstream 2000 false Chr2: 1339271-1341270 Arabidopsis thaliana
AT2G04050 2.0kb downstream 2.0kb downstream 3885 true Chr2: 1335386-1339270 Arabidopsis thaliana
AT2G04050 2.0kb downstream 2.0kb downstream 2000 false Chr2: 1335386-1337385 Arabidopsis thaliana
AT2G04050 5.0kb upstream 5.0kb upstream 6885 true Chr2: 1337386-1344270 Arabidopsis thaliana
AT2G04050 5.0kb upstream 5.0kb upstream 5000 false Chr2: 1339271-1344270 Arabidopsis thaliana
AT2G04050 5.0kb downstream 5.0kb downstream 6885 true Chr2: 1332386-1339270 Arabidopsis thaliana
AT2G04050 5.0kb downstream 5.0kb downstream 5000 false Chr2: 1332386-1337385 Arabidopsis thaliana
AT2G04050 10.0kb upstream 10.0kb upstream 11885 true Chr2: 1337386-1349270 Arabidopsis thaliana
AT2G04050 10.0kb upstream 10.0kb upstream 10000 false Chr2: 1339271-1349270 Arabidopsis thaliana
AT2G04050 10.0kb downstream 10.0kb downstream 11885 true Chr2: 1327386-1339270 Arabidopsis thaliana
AT2G04050 10.0kb downstream 10.0kb downstream 10000 false Chr2: 1327386-1337385 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379492 5261 Brassicaceae View MSA
123838699 5264 Brassicales-Malvales View MSA
124346775 5266 SBM View MSA
124254486 5268 Malvidae View MSA
124070136 5270 Rosid View MSA
123747121 5271 Pentapetalae View MSA
122794225 5272 Eudicot View MSA
122042479 5273 Angiosperm View MSA
121350842 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.065        
cufflinks 0.169     Low  
cufflinks 23.431       High
cufflinks 1.405        
cufflinks 19.173       High
cufflinks 0.041     Low Low

0 Strain