Gene : SFH3 A. thaliana TAIR10
Primary Identifier:  ? AT2G21540 Defline:  (1 of 2) PTHR23324:SF71 - PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH2-RELATED
Genomic Order:  1413 Name:  ? AT2G21540
Secondary Identifier:  ? PAC:19643349
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G21540 0.5kb upstream 0.5kb upstream 4448 true Chr2: 9220549-9224996 Arabidopsis thaliana
AT2G21540 0.5kb upstream 0.5kb upstream 500 false Chr2: 9224497-9224996 Arabidopsis thaliana
AT2G21540 0.5kb downstream 0.5kb downstream 4448 true Chr2: 9220049-9224496 Arabidopsis thaliana
AT2G21540 0.5kb downstream 0.5kb downstream 500 false Chr2: 9220049-9220548 Arabidopsis thaliana
AT2G21540 1.0kb upstream 1.0kb upstream 4948 true Chr2: 9220549-9225496 Arabidopsis thaliana
AT2G21540 1.0kb upstream 1.0kb upstream 1000 false Chr2: 9224497-9225496 Arabidopsis thaliana
AT2G21540 1.0kb downstream 1.0kb downstream 4948 true Chr2: 9219549-9224496 Arabidopsis thaliana
AT2G21540 1.0kb downstream 1.0kb downstream 1000 false Chr2: 9219549-9220548 Arabidopsis thaliana
AT2G21540 2.0kb upstream 2.0kb upstream 5948 true Chr2: 9220549-9226496 Arabidopsis thaliana
AT2G21540 2.0kb upstream 2.0kb upstream 2000 false Chr2: 9224497-9226496 Arabidopsis thaliana
AT2G21540 2.0kb downstream 2.0kb downstream 5948 true Chr2: 9218549-9224496 Arabidopsis thaliana
AT2G21540 2.0kb downstream 2.0kb downstream 2000 false Chr2: 9218549-9220548 Arabidopsis thaliana
AT2G21540 5.0kb upstream 5.0kb upstream 8948 true Chr2: 9220549-9229496 Arabidopsis thaliana
AT2G21540 5.0kb upstream 5.0kb upstream 5000 false Chr2: 9224497-9229496 Arabidopsis thaliana
AT2G21540 5.0kb downstream 5.0kb downstream 8948 true Chr2: 9215549-9224496 Arabidopsis thaliana
AT2G21540 5.0kb downstream 5.0kb downstream 5000 false Chr2: 9215549-9220548 Arabidopsis thaliana
AT2G21540 10.0kb upstream 10.0kb upstream 13948 true Chr2: 9220549-9234496 Arabidopsis thaliana
AT2G21540 10.0kb upstream 10.0kb upstream 10000 false Chr2: 9224497-9234496 Arabidopsis thaliana
AT2G21540 10.0kb downstream 10.0kb downstream 13948 true Chr2: 9210549-9224496 Arabidopsis thaliana
AT2G21540 10.0kb downstream 10.0kb downstream 10000 false Chr2: 9210549-9220548 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362561 5261 Brassicaceae View MSA
123830096 5264 Brassicales-Malvales View MSA
124351569 5266 SBM View MSA
124242476 5268 Malvidae View MSA
124068521 5270 Rosid View MSA
123742729 5271 Pentapetalae View MSA
122786942 5272 Eudicot View MSA
122050588 5273 Angiosperm View MSA
123429024 5275 Viridiplantae View MSA
121351321 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.222       High
cufflinks 0.237     Low Low
cufflinks 1.07       High
cufflinks 0.332     Low  
cufflinks 0.372        
cufflinks 0.416        

0 Strain