Gene : GCL2 A. thaliana TAIR10
Primary Identifier:  ? AT2G20770 Defline:  (1 of 2) PTHR12736//PTHR12736:SF13 - LANC-LIKE PROTEIN // SUBFAMILY NOT NAMED
Genomic Order:  1328 Name:  ? AT2G20770
Secondary Identifier:  ? PAC:19638858
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G20770 0.5kb upstream 0.5kb upstream 2493 true Chr2: 8944818-8947310 Arabidopsis thaliana
AT2G20770 0.5kb upstream 0.5kb upstream 500 false Chr2: 8944818-8945317 Arabidopsis thaliana
AT2G20770 0.5kb downstream 0.5kb downstream 2493 true Chr2: 8945318-8947810 Arabidopsis thaliana
AT2G20770 0.5kb downstream 0.5kb downstream 500 false Chr2: 8947311-8947810 Arabidopsis thaliana
AT2G20770 1.0kb upstream 1.0kb upstream 2993 true Chr2: 8944318-8947310 Arabidopsis thaliana
AT2G20770 1.0kb upstream 1.0kb upstream 1000 false Chr2: 8944318-8945317 Arabidopsis thaliana
AT2G20770 1.0kb downstream 1.0kb downstream 2993 true Chr2: 8945318-8948310 Arabidopsis thaliana
AT2G20770 1.0kb downstream 1.0kb downstream 1000 false Chr2: 8947311-8948310 Arabidopsis thaliana
AT2G20770 2.0kb upstream 2.0kb upstream 3993 true Chr2: 8943318-8947310 Arabidopsis thaliana
AT2G20770 2.0kb upstream 2.0kb upstream 2000 false Chr2: 8943318-8945317 Arabidopsis thaliana
AT2G20770 2.0kb downstream 2.0kb downstream 3993 true Chr2: 8945318-8949310 Arabidopsis thaliana
AT2G20770 2.0kb downstream 2.0kb downstream 2000 false Chr2: 8947311-8949310 Arabidopsis thaliana
AT2G20770 5.0kb upstream 5.0kb upstream 6993 true Chr2: 8940318-8947310 Arabidopsis thaliana
AT2G20770 5.0kb upstream 5.0kb upstream 5000 false Chr2: 8940318-8945317 Arabidopsis thaliana
AT2G20770 5.0kb downstream 5.0kb downstream 6993 true Chr2: 8945318-8952310 Arabidopsis thaliana
AT2G20770 5.0kb downstream 5.0kb downstream 5000 false Chr2: 8947311-8952310 Arabidopsis thaliana
AT2G20770 10.0kb upstream 10.0kb upstream 11993 true Chr2: 8935318-8947310 Arabidopsis thaliana
AT2G20770 10.0kb upstream 10.0kb upstream 10000 false Chr2: 8935318-8945317 Arabidopsis thaliana
AT2G20770 10.0kb downstream 10.0kb downstream 11993 true Chr2: 8945318-8957310 Arabidopsis thaliana
AT2G20770 10.0kb downstream 10.0kb downstream 10000 false Chr2: 8947311-8957310 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376533 5261 Brassicaceae View MSA
123827996 5264 Brassicales-Malvales View MSA
124321500 5266 SBM View MSA
124240012 5268 Malvidae View MSA
124065113 5270 Rosid View MSA
123737530 5271 Pentapetalae View MSA
122788012 5272 Eudicot View MSA
122042680 5273 Angiosperm View MSA
121348546 5274 Embryophyte View MSA
123425935 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.521        
cufflinks 5.103       High
cufflinks 2.565       Low
cufflinks 5.02       High
cufflinks 2.767       Low
cufflinks 4.048        

0 Strain