Gene : AT2G20270 A. thaliana TAIR10
Defline:  (1 of 2) PTHR10168//PTHR10168:SF14 - GLUTAREDOXIN // GLUTAREDOXIN-C5, CHLOROPLASTIC-RELATED Genomic Order:  1264
Name:  ? AT2G20270 Secondary Identifier:  ? PAC:19642849
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana THIOREDOX-PWY Arabidopsis thaliana pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G20270 0.5kb upstream 0.5kb upstream 2473 true Chr2: 8737705-8740177 Arabidopsis thaliana
AT2G20270 0.5kb upstream 0.5kb upstream 500 false Chr2: 8739678-8740177 Arabidopsis thaliana
AT2G20270 0.5kb downstream 0.5kb downstream 2473 true Chr2: 8737205-8739677 Arabidopsis thaliana
AT2G20270 0.5kb downstream 0.5kb downstream 500 false Chr2: 8737205-8737704 Arabidopsis thaliana
AT2G20270 1.0kb upstream 1.0kb upstream 2973 true Chr2: 8737705-8740677 Arabidopsis thaliana
AT2G20270 1.0kb upstream 1.0kb upstream 1000 false Chr2: 8739678-8740677 Arabidopsis thaliana
AT2G20270 1.0kb downstream 1.0kb downstream 2973 true Chr2: 8736705-8739677 Arabidopsis thaliana
AT2G20270 1.0kb downstream 1.0kb downstream 1000 false Chr2: 8736705-8737704 Arabidopsis thaliana
AT2G20270 2.0kb upstream 2.0kb upstream 3973 true Chr2: 8737705-8741677 Arabidopsis thaliana
AT2G20270 2.0kb upstream 2.0kb upstream 2000 false Chr2: 8739678-8741677 Arabidopsis thaliana
AT2G20270 2.0kb downstream 2.0kb downstream 3973 true Chr2: 8735705-8739677 Arabidopsis thaliana
AT2G20270 2.0kb downstream 2.0kb downstream 2000 false Chr2: 8735705-8737704 Arabidopsis thaliana
AT2G20270 5.0kb upstream 5.0kb upstream 6973 true Chr2: 8737705-8744677 Arabidopsis thaliana
AT2G20270 5.0kb upstream 5.0kb upstream 5000 false Chr2: 8739678-8744677 Arabidopsis thaliana
AT2G20270 5.0kb downstream 5.0kb downstream 6973 true Chr2: 8732705-8739677 Arabidopsis thaliana
AT2G20270 5.0kb downstream 5.0kb downstream 5000 false Chr2: 8732705-8737704 Arabidopsis thaliana
AT2G20270 10.0kb upstream 10.0kb upstream 11973 true Chr2: 8737705-8749677 Arabidopsis thaliana
AT2G20270 10.0kb upstream 10.0kb upstream 10000 false Chr2: 8739678-8749677 Arabidopsis thaliana
AT2G20270 10.0kb downstream 10.0kb downstream 11973 true Chr2: 8727705-8739677 Arabidopsis thaliana
AT2G20270 10.0kb downstream 10.0kb downstream 10000 false Chr2: 8727705-8737704 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026565 5273 Angiosperm View MSA
122370271 5261 Brassicaceae View MSA
123799928 5264 Brassicales-Malvales View MSA
124297397 5266 SBM View MSA
124252514 5268 Malvidae View MSA
124066843 5270 Rosid View MSA
123737863 5271 Pentapetalae View MSA
122787960 5272 Eudicot View MSA
121350843 5274 Embryophyte View MSA
123428660 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.851        
cufflinks 4.722        
cufflinks 16.874       High
cufflinks 4.319        
cufflinks 13.478        
cufflinks 4.737        

0 Strain