Gene : NADP-ME1 A. thaliana TAIR10
Primary Identifier:  ? AT2G19900 Defline:  (1 of 1) PTHR23406:SF26 - NADP-DEPENDENT MALIC ENZYME 1
Genomic Order:  1229 Name:  ? AT2G19900
Secondary Identifier:  ? PAC:19638614
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana GLUCONEO-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-241 Arabidopsis thaliana pathologic  
Athaliana PWY-7117 Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G19900 0.5kb upstream 0.5kb upstream 4080 true Chr2: 8591899-8595978 Arabidopsis thaliana
AT2G19900 0.5kb upstream 0.5kb upstream 500 false Chr2: 8595479-8595978 Arabidopsis thaliana
AT2G19900 0.5kb downstream 0.5kb downstream 4080 true Chr2: 8591399-8595478 Arabidopsis thaliana
AT2G19900 0.5kb downstream 0.5kb downstream 500 false Chr2: 8591399-8591898 Arabidopsis thaliana
AT2G19900 1.0kb upstream 1.0kb upstream 4580 true Chr2: 8591899-8596478 Arabidopsis thaliana
AT2G19900 1.0kb upstream 1.0kb upstream 1000 false Chr2: 8595479-8596478 Arabidopsis thaliana
AT2G19900 1.0kb downstream 1.0kb downstream 4580 true Chr2: 8590899-8595478 Arabidopsis thaliana
AT2G19900 1.0kb downstream 1.0kb downstream 1000 false Chr2: 8590899-8591898 Arabidopsis thaliana
AT2G19900 2.0kb upstream 2.0kb upstream 5580 true Chr2: 8591899-8597478 Arabidopsis thaliana
AT2G19900 2.0kb upstream 2.0kb upstream 2000 false Chr2: 8595479-8597478 Arabidopsis thaliana
AT2G19900 2.0kb downstream 2.0kb downstream 5580 true Chr2: 8589899-8595478 Arabidopsis thaliana
AT2G19900 2.0kb downstream 2.0kb downstream 2000 false Chr2: 8589899-8591898 Arabidopsis thaliana
AT2G19900 5.0kb upstream 5.0kb upstream 8580 true Chr2: 8591899-8600478 Arabidopsis thaliana
AT2G19900 5.0kb upstream 5.0kb upstream 5000 false Chr2: 8595479-8600478 Arabidopsis thaliana
AT2G19900 5.0kb downstream 5.0kb downstream 8580 true Chr2: 8586899-8595478 Arabidopsis thaliana
AT2G19900 5.0kb downstream 5.0kb downstream 5000 false Chr2: 8586899-8591898 Arabidopsis thaliana
AT2G19900 10.0kb upstream 10.0kb upstream 13580 true Chr2: 8591899-8605478 Arabidopsis thaliana
AT2G19900 10.0kb upstream 10.0kb upstream 10000 false Chr2: 8595479-8605478 Arabidopsis thaliana
AT2G19900 10.0kb downstream 10.0kb downstream 13580 true Chr2: 8581899-8595478 Arabidopsis thaliana
AT2G19900 10.0kb downstream 10.0kb downstream 10000 false Chr2: 8581899-8591898 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370204 5261 Brassicaceae View MSA
123799916 5264 Brassicales-Malvales View MSA
124348788 5266 SBM View MSA
124247919 5268 Malvidae View MSA
124068705 5270 Rosid View MSA
123751350 5271 Pentapetalae View MSA
122794130 5272 Eudicot View MSA
122042224 5273 Angiosperm View MSA
121345569 5274 Embryophyte View MSA
123428715 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.133     Low  
cufflinks 0.878        
cufflinks 0.006     Low Low
cufflinks 3.28       High
cufflinks 0.063     Low  
cufflinks 1.186        

0 Strain