Gene : PERK4 A. thaliana TAIR10
Primary Identifier:  ? AT2G18470 Defline:  (1 of 1) PTHR27001//PTHR27001:SF192 - FAMILY NOT NAMED // PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4
Genomic Order:  1084 Name:  ? AT2G18470
Secondary Identifier:  ? PAC:19639581
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G18470 0.5kb upstream 0.5kb upstream 3268 true Chr2: 8005285-8008552 Arabidopsis thaliana
AT2G18470 0.5kb upstream 0.5kb upstream 500 false Chr2: 8008053-8008552 Arabidopsis thaliana
AT2G18470 0.5kb downstream 0.5kb downstream 3268 true Chr2: 8004785-8008052 Arabidopsis thaliana
AT2G18470 0.5kb downstream 0.5kb downstream 500 false Chr2: 8004785-8005284 Arabidopsis thaliana
AT2G18470 1.0kb upstream 1.0kb upstream 3768 true Chr2: 8005285-8009052 Arabidopsis thaliana
AT2G18470 1.0kb upstream 1.0kb upstream 1000 false Chr2: 8008053-8009052 Arabidopsis thaliana
AT2G18470 1.0kb downstream 1.0kb downstream 3768 true Chr2: 8004285-8008052 Arabidopsis thaliana
AT2G18470 1.0kb downstream 1.0kb downstream 1000 false Chr2: 8004285-8005284 Arabidopsis thaliana
AT2G18470 2.0kb upstream 2.0kb upstream 4768 true Chr2: 8005285-8010052 Arabidopsis thaliana
AT2G18470 2.0kb upstream 2.0kb upstream 2000 false Chr2: 8008053-8010052 Arabidopsis thaliana
AT2G18470 2.0kb downstream 2.0kb downstream 4768 true Chr2: 8003285-8008052 Arabidopsis thaliana
AT2G18470 2.0kb downstream 2.0kb downstream 2000 false Chr2: 8003285-8005284 Arabidopsis thaliana
AT2G18470 5.0kb upstream 5.0kb upstream 7768 true Chr2: 8005285-8013052 Arabidopsis thaliana
AT2G18470 5.0kb upstream 5.0kb upstream 5000 false Chr2: 8008053-8013052 Arabidopsis thaliana
AT2G18470 5.0kb downstream 5.0kb downstream 7768 true Chr2: 8000285-8008052 Arabidopsis thaliana
AT2G18470 5.0kb downstream 5.0kb downstream 5000 false Chr2: 8000285-8005284 Arabidopsis thaliana
AT2G18470 10.0kb upstream 10.0kb upstream 12768 true Chr2: 8005285-8018052 Arabidopsis thaliana
AT2G18470 10.0kb upstream 10.0kb upstream 10000 false Chr2: 8008053-8018052 Arabidopsis thaliana
AT2G18470 10.0kb downstream 10.0kb downstream 12768 true Chr2: 7995285-8008052 Arabidopsis thaliana
AT2G18470 10.0kb downstream 10.0kb downstream 10000 false Chr2: 7995285-8005284 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375637 5261 Brassicaceae View MSA
123835910 5264 Brassicales-Malvales View MSA
124341384 5266 SBM View MSA
124249903 5268 Malvidae View MSA
124074896 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.118     Low  
cufflinks 6.129        
cufflinks 0.075     Low Low
cufflinks 12.043       High
cufflinks 0.345        
cufflinks 6.636        

0 Strain