Gene : AT2G18090 A. thaliana TAIR10
Defline:  (1 of 1) PTHR22884//PTHR22884:SF339 - SET DOMAIN PROTEINS // PHD FINGER, SWIB/MDM2 AND GYF DOMAIN-CONTAINING PROTEIN Genomic Order:  1043
Name:  ? AT2G18090 Secondary Identifier:  ? PAC:19639630
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G18090 0.5kb upstream 0.5kb upstream 3953 true Chr2: 7863814-7867766 Arabidopsis thaliana
AT2G18090 0.5kb upstream 0.5kb upstream 500 false Chr2: 7863814-7864313 Arabidopsis thaliana
AT2G18090 0.5kb downstream 0.5kb downstream 3953 true Chr2: 7864314-7868266 Arabidopsis thaliana
AT2G18090 0.5kb downstream 0.5kb downstream 500 false Chr2: 7867767-7868266 Arabidopsis thaliana
AT2G18090 1.0kb upstream 1.0kb upstream 4453 true Chr2: 7863314-7867766 Arabidopsis thaliana
AT2G18090 1.0kb upstream 1.0kb upstream 1000 false Chr2: 7863314-7864313 Arabidopsis thaliana
AT2G18090 1.0kb downstream 1.0kb downstream 4453 true Chr2: 7864314-7868766 Arabidopsis thaliana
AT2G18090 1.0kb downstream 1.0kb downstream 1000 false Chr2: 7867767-7868766 Arabidopsis thaliana
AT2G18090 2.0kb upstream 2.0kb upstream 5453 true Chr2: 7862314-7867766 Arabidopsis thaliana
AT2G18090 2.0kb upstream 2.0kb upstream 2000 false Chr2: 7862314-7864313 Arabidopsis thaliana
AT2G18090 2.0kb downstream 2.0kb downstream 5453 true Chr2: 7864314-7869766 Arabidopsis thaliana
AT2G18090 2.0kb downstream 2.0kb downstream 2000 false Chr2: 7867767-7869766 Arabidopsis thaliana
AT2G18090 5.0kb upstream 5.0kb upstream 8453 true Chr2: 7859314-7867766 Arabidopsis thaliana
AT2G18090 5.0kb upstream 5.0kb upstream 5000 false Chr2: 7859314-7864313 Arabidopsis thaliana
AT2G18090 5.0kb downstream 5.0kb downstream 8453 true Chr2: 7864314-7872766 Arabidopsis thaliana
AT2G18090 5.0kb downstream 5.0kb downstream 5000 false Chr2: 7867767-7872766 Arabidopsis thaliana
AT2G18090 10.0kb upstream 10.0kb upstream 13453 true Chr2: 7854314-7867766 Arabidopsis thaliana
AT2G18090 10.0kb upstream 10.0kb upstream 10000 false Chr2: 7854314-7864313 Arabidopsis thaliana
AT2G18090 10.0kb downstream 10.0kb downstream 13453 true Chr2: 7864314-7877766 Arabidopsis thaliana
AT2G18090 10.0kb downstream 10.0kb downstream 10000 false Chr2: 7867767-7877766 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365616 5261 Brassicaceae View MSA
123798997 5264 Brassicales-Malvales View MSA
124296565 5266 SBM View MSA
124148678 5268 Malvidae View MSA
123874629 5270 Rosid View MSA
123753023 5271 Pentapetalae View MSA
122797063 5272 Eudicot View MSA
122044287 5273 Angiosperm View MSA
121348598 5274 Embryophyte View MSA
123380932 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.227        
cufflinks 39.68     High High
cufflinks 12.056        
cufflinks 33.179     High  
cufflinks 12.282        
cufflinks 29.772     High  

0 Strain