Gene : AT2G17180 A. thaliana TAIR10
Defline:  (1 of 43) PF13912 - C2H2-type zinc finger (zf-C2H2_6) Genomic Order:  946
Name:  ? AT2G17180 Secondary Identifier:  ? PAC:19639954
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G17180 0.5kb upstream 0.5kb upstream 1313 true Chr2: 7476835-7478147 Arabidopsis thaliana
AT2G17180 0.5kb upstream 0.5kb upstream 500 false Chr2: 7477648-7478147 Arabidopsis thaliana
AT2G17180 0.5kb downstream 0.5kb downstream 1313 true Chr2: 7476335-7477647 Arabidopsis thaliana
AT2G17180 0.5kb downstream 0.5kb downstream 500 false Chr2: 7476335-7476834 Arabidopsis thaliana
AT2G17180 1.0kb upstream 1.0kb upstream 1813 true Chr2: 7476835-7478647 Arabidopsis thaliana
AT2G17180 1.0kb upstream 1.0kb upstream 1000 false Chr2: 7477648-7478647 Arabidopsis thaliana
AT2G17180 1.0kb downstream 1.0kb downstream 1813 true Chr2: 7475835-7477647 Arabidopsis thaliana
AT2G17180 1.0kb downstream 1.0kb downstream 1000 false Chr2: 7475835-7476834 Arabidopsis thaliana
AT2G17180 2.0kb upstream 2.0kb upstream 2813 true Chr2: 7476835-7479647 Arabidopsis thaliana
AT2G17180 2.0kb upstream 2.0kb upstream 2000 false Chr2: 7477648-7479647 Arabidopsis thaliana
AT2G17180 2.0kb downstream 2.0kb downstream 2813 true Chr2: 7474835-7477647 Arabidopsis thaliana
AT2G17180 2.0kb downstream 2.0kb downstream 2000 false Chr2: 7474835-7476834 Arabidopsis thaliana
AT2G17180 5.0kb upstream 5.0kb upstream 5813 true Chr2: 7476835-7482647 Arabidopsis thaliana
AT2G17180 5.0kb upstream 5.0kb upstream 5000 false Chr2: 7477648-7482647 Arabidopsis thaliana
AT2G17180 5.0kb downstream 5.0kb downstream 5813 true Chr2: 7471835-7477647 Arabidopsis thaliana
AT2G17180 5.0kb downstream 5.0kb downstream 5000 false Chr2: 7471835-7476834 Arabidopsis thaliana
AT2G17180 10.0kb upstream 10.0kb upstream 10813 true Chr2: 7476835-7487647 Arabidopsis thaliana
AT2G17180 10.0kb upstream 10.0kb upstream 10000 false Chr2: 7477648-7487647 Arabidopsis thaliana
AT2G17180 10.0kb downstream 10.0kb downstream 10813 true Chr2: 7466835-7477647 Arabidopsis thaliana
AT2G17180 10.0kb downstream 10.0kb downstream 10000 false Chr2: 7466835-7476834 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377282 5261 Brassicaceae View MSA
123801490 5264 Brassicales-Malvales View MSA
124349974 5266 SBM View MSA
124241914 5268 Malvidae View MSA
124071192 5270 Rosid View MSA
123746737 5271 Pentapetalae View MSA
122795761 5272 Eudicot View MSA
122051585 5273 Angiosperm View MSA
121348252 5274 Embryophyte View MSA
123380791 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.038     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.02     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.078     Low High

0 Strain